ModCRE DB

Transcription factor

Q9H7R0 - ZNF442

Zinc finger protein 442

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 627 aa

50 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07742_2.00 Known CisBP ACTCTTTCTCTGCTGCAACACCTGCTGTT Direct PWM Open · Scan
Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M07733_2.00 NN 70+% CisBP TCTTTCTCTCTCTCC 81.5% identity Open · Scan
M07659_2.00 NN 70+% CisBP GTCTTCCAAGTAGCTGGTGTT 76.4% identity Open · Scan
M07731_2.00 NN 70+% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 75.4% identity Open · Scan
Nearest Neighbor (70% - 40%)46
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 66.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 61.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 60.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 59.7% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 58.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 58.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 57.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.4% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 56.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.8% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 54.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 54.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.6% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 53.6% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 52.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 52.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 52.3% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.5% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.3% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.5% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.4% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 50.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 50.3% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 50.3% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 50.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 50.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 50.3% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.2% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 50.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 627 aa
208-316

Region 208-316 0 PWM

Residues
109 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 208-3161 model
Actions
Predicted = Low TFS_Q9H7R0:208:316_5eh2_F_1 5eh2 208-316 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
28-69PF01352KRAB boxNo overlap with loaded model regions
181-200PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
265-287PF00096Zinc finger, C2H2 typeoverlaps 208-316
293-315PF00096Zinc finger, C2H2 typeoverlaps 208-316
321-343PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
349-371PF13894C2H2-type zinc fingerNo overlap with loaded model regions
377-399PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
405-427PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
433-455PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
488-513PF13912C2H2-type zinc fingerNo overlap with loaded model regions
516-538PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
572-594PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
600-624PF13912C2H2-type zinc fingerNo overlap with loaded model regions