ModCRE DB

Transcription factor

Q9H7R5 - ZNF665

Zinc finger protein 665 (Zinc finger protein 160-like)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 678 aa

75 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 72.9% identity Open · Scan
M00939_2.00 NN 70+% CisBP CCACCTCA 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)73
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 66.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 63.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 63.1% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 61.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 61.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.7% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 58.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 58.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 58.5% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 58.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 58.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 57.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.1% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 56.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 56.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 56.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 56.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.7% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 55.7% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 55.5% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 55.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.9% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 54.9% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 54.4% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 54.3% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 54.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.1% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 53.9% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 53.7% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.7% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 53.7% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 53.6% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 53.2% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 53.1% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 53.0% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 52.9% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.8% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.8% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.4% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 52.2% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 52.1% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 51.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.8% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M07740_2.00 NN 70-40% CisBP TCCTGATTCCACACTCAAACATAACTTT 50.8% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 50.8% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.7% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 678 aa
187-340

Region 187-340 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 187-3401 model
Actions
Predicted = Low TFS_Q9H7R5:187:340_2i13_A_1 2i13 187-340 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
178-200PF00096Zinc finger, C2H2 typeoverlaps 187-340
206-228PF00096Zinc finger, C2H2 typeoverlaps 187-340
234-256PF00096Zinc finger, C2H2 typeoverlaps 187-340
262-284PF00096Zinc finger, C2H2 typeoverlaps 187-340
290-312PF00096Zinc finger, C2H2 typeoverlaps 187-340
318-340PF00096Zinc finger, C2H2 typeoverlaps 187-340
346-368PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
374-396PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
402-424PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
430-452PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
458-480PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
486-508PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
514-536PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
542-564PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
570-592PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
598-620PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
626-648PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
654-676PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions