ModCRE DB

Transcription factor

Q9HC78 - ZBTB20

Zinc finger and BTB domain-containing protein 20 (Dendritic-derived BTB/POZ zinc finger protein) (Zinc finger protein 288)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 741 aa

8 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M04599_2.00 Known CisBP TCTATACATTAA Direct PWM Open · Scan
M04600_2.00 Known CisBP TCTATACATTAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q9HC78_ZBT20_HUMAN:604:652_1llm_D_1 ModCRE Homology model TTTACGCGAAAA Region 604-652 · 1 3D model Open · Scan
TFS_sp_Q9HC78_ZBT20_HUMAN:574:684_2jp9_A_1 ModCRE Homology model CCCCGGGGGGGGAAAAT Region 574-684 · 1 3D model Open · Scan
TFS_sp_Q9HC78_ZBT20_HUMAN:574:684_2jpa_A_1 ModCRE Homology model CTCCGGGGGGGGCT Region 574-684 · 1 3D model Open · Scan
TFS_sp_Q9HC78_ZBT20_HUMAN:575:685_5egb_A_1 ModCRE Homology model CCGGAGAGTGGGGGACCC Region 575-685 · 1 3D model Open · Scan
TFS_sp_Q9HC78_ZBT20_HUMAN:575:685_5ei9_E_1 ModCRE Homology model CCGGAGGGGGGGACCGC Region 575-685 · 1 3D model Open · Scan
TFS_sp_Q9HC78_ZBT20_HUMAN:577:685_5eh2_F_1 ModCRE Homology model CCCCAGGGGGCGGGCGTTC Region 577-685 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 741 aa
574-685

Region 574-685 6 PWM

Residues
112 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 2JPA, 5EGB, 5EH2, 5EI9, 6ML4, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 574-68511 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q9HC78_ZBT20_HUMAN:604:652_1llm_D_1 1llm 604-652 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:574:684_2jp9_A_1 2jp9 574-684 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:574:684_2jpa_A_1 2jpa 574-684 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:575:685_5egb_A_1 5egb 575-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:575:685_5ei9_E_1 5ei9 575-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_2i13_A_1 2i13 576-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml4_A_1 6ml4 576-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml5_A_1 6ml5 576-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml6_A_1 6ml6 576-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml7_A_1 6ml7 576-685 View model · PDB
Predicted = Low TFS_sp_Q9HC78_ZBT20_HUMAN:577:685_5eh2_F_1 5eh2 577-685 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 6ml7 574:688 576 685 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml7_A_1
3 6ml6 574:688 576 685 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml6_A_1
4 6ml4 574:688 576 685 P:A · DNA:E,F 46.4% / 56.4% 76 View · PDB TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml4_A_1
5 6ml5 574:688 576 685 P:A · DNA:E,F 46.4% / 56.4% 77 View · PDB TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_6ml5_A_1
1 2i13 574:688 576 685 P:A · DNA:C,D 43.6% / 58.2% 72 View · PDB TFS_sp_Q9HC78_ZBT20_HUMAN:576:685_2i13_A_1
1 1llm 574:688 604,604 652,652 P:C,D · DNA:A,B 42.9% / 59.2% 56,57 View · PDB DIMER_sp_Q9HC78_ZBT20_HUMAN:604:652_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
94-195PF00651BTB/POZ domainNo overlap with loaded model regions
578-600PF00096Zinc finger, C2H2 typeoverlaps 574-685
606-628PF00096Zinc finger, C2H2 typeoverlaps 574-685
634-656PF00096Zinc finger, C2H2 typeoverlaps 574-685
662-684PF00096Zinc finger, C2H2 typeoverlaps 574-685
715-737PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions