ModCRE DB

Transcription factor

Q9HCG1 - ZNF160

Zinc finger protein 160 (Zinc finger protein HZF5) (Zinc finger protein Kr18) (HKr18)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 818 aa

91 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 72.9% identity Open · Scan
Nearest Neighbor (70% - 40%)90
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 69.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 64.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.5% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 61.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 60.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 60.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 60.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.1% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 60.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 60.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 59.1% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.9% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 57.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.4% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 56.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.2% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 56.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.3% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 55.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.9% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.4% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.2% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 54.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 54.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.7% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 53.4% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 53.4% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 52.8% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 52.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 52.5% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.5% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.5% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.4% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 52.1% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.1% identity Open · Scan
M07759_2.00 NN 70-40% CisBP GGAGCGCCCCTGCCCGGC 51.9% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.7% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 51.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.5% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 51.5% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 51.4% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.4% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 51.1% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 51.1% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.8% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 50.8% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 50.7% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 50.7% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.6% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 50.5% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.1% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.0% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 50.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 818 aa
368-644

Region 368-644 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 368-6441 model
Actions
Predicted = Low TFS_Q9HCG1:368:644_5v3j_E_1 5v3j 368-644 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
285-307PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
313-335PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
341-363PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
369-391PF00096Zinc finger, C2H2 typeoverlaps 368-644
397-419PF00096Zinc finger, C2H2 typeoverlaps 368-644
425-447PF00096Zinc finger, C2H2 typeoverlaps 368-644
453-475PF00096Zinc finger, C2H2 typeoverlaps 368-644
481-503PF00096Zinc finger, C2H2 typeoverlaps 368-644
509-531PF00096Zinc finger, C2H2 typeoverlaps 368-644
537-559PF00096Zinc finger, C2H2 typeoverlaps 368-644
565-587PF00096Zinc finger, C2H2 typeoverlaps 368-644
593-615PF00096Zinc finger, C2H2 typeoverlaps 368-644
621-643PF00096Zinc finger, C2H2 typeoverlaps 368-644
649-671PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
677-699PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
705-727PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
733-755PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
761-783PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
789-811PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions