ModCRE DB

Transcription factor

Q9HCZ1 - ZNF334

Zinc finger protein 334

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 680 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07740_2.00 Known CisBP TCCTGATTCCACACTCAAACATAACTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 680 aa
206-484

Region 206-484 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 206-4841 model
Actions
Predicted = Low TFS_Q9HCZ1:206:484_5wjq_D_1 5wjq 206-484 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
9-50PF01352KRAB boxNo overlap with loaded model regions
238-259PF00096Zinc finger, C2H2 typeoverlaps 206-484
265-287PF00096Zinc finger, C2H2 typeoverlaps 206-484
293-315PF00096Zinc finger, C2H2 typeoverlaps 206-484
321-343PF00096Zinc finger, C2H2 typeoverlaps 206-484
349-371PF00096Zinc finger, C2H2 typeoverlaps 206-484
378-399PF00096Zinc finger, C2H2 typeoverlaps 206-484
405-427PF13912C2H2-type zinc fingeroverlaps 206-484
433-455PF00096Zinc finger, C2H2 typeoverlaps 206-484
461-483PF00096Zinc finger, C2H2 typeoverlaps 206-484
544-566PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
572-594PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
600-622PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
628-650PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
656-678PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions