Transcription factor

Q9NP62 - GCM1

Chorion-specific transcription factor GCMa (hGCMa) (GCM motif protein 1) (Glial cells missing homolog 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 436 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9

Motif	Prediction	Source	DNA binding	Support	Actions
MA0646.1	Known	JASPAR	CATGCGGGTAC	Direct PWM	Open · Scan
MA0646.2	Known	JASPAR	ATGCGGGTAC	Direct PWM	Open · Scan
M02020_2.00	Known	CisBP	GATGCGGGT	Direct PWM	Open · Scan
M03068_2.00	Known	CisBP	CATGCGGGTA	Direct PWM	Open · Scan
M03069_2.00	Known	CisBP	ATGCGGGTACCCGCAT	Direct PWM	Open · Scan
M03070_2.00	Known	CisBP	CATGCGGGTAC	Direct PWM	Open · Scan
M04883_2.00	Known	CisBP	ATGCGGGTG	Direct PWM	Open · Scan
M04884_2.00	Known	CisBP	ATGGGGGTA	Direct PWM	Open · Scan
M05868_2.00	Known	CisBP	ATGCGGGTA	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 436 aa

88-116

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 88-1161 model

				Actions
Predicted = Low	DIMER_Q9NP62:88:116_1r4i_B_1	1r4i	88-116	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
30-175	PF03615	GCM motif protein	overlaps 88-116