Region 46-67 1 PWM
- Residues
- 22 aa
- Domains
- PF25445 · ZFPM2-like CCHC zinc finger
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 5K5I, 5K5L
- Sources
- Predicted = Low
Transcription factor
Q9NPQ0
FOG2, frind of GATA2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 79 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5l_E_1 | ModCRE | Homology model | AAAAAA | Region 46-67 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
79 aa
46-67
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 46-673 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5i_A_1 | 5k5i | 46-67 | View model · PDB |
| Predicted = Low | TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5l_E_1 | 5k5l | 46-67 | View model · PDB |
| Predicted = Low | TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5l_F_1 | 5k5l | 46-67 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 5k5l | 46:67 | 46 | 67 | P:F · DNA:A,B,C,D | 45.5% / 54.5% | 38 | View · PDB TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5l_F_1 |
| 2 | 5k5l | 46:67 | 46 | 67 | P:E · DNA:A,B,C,D | 45.5% / 54.5% | 39 | View · PDB TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5l_E_1 |
| 3 | 5k5i | 46:67 | 46 | 67 | P:A · DNA:B,C | 45.5% / 54.5% | 19 | View · PDB TFS_tr_Q9NPQ0_Q9NPQ0_HUMAN:46:67_5k5i_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 44-79 | PF25445 | ZFPM2-like CCHC zinc finger | overlaps 46-67 |