ModCRE DB

Transcription factor

Q9NQ03 - SCRT2

Transcriptional repressor scratch 2 (Scratch homolog 2 zinc finger protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 307 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0744.1 Known JASPAR ATGCAACAGGTGG Direct PWM Open · Scan
MA0744.2 Known JASPAR AAAGCAACAGGTGGTT Direct PWM Open · Scan
MA0744.3 Known JASPAR GCAACAGGTG Direct PWM Open · Scan
M02925_2.00 Known CisBP ATGCAACAGGTGG Direct PWM Open · Scan
M04643_2.00 Known CisBP AGCAACAGGTG Direct PWM Open · Scan
M04644_2.00 Known CisBP AGCAACAGGTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 307 aa
155-286

Region 155-286 0 PWM

Residues
132 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 155-2861 model
Actions
Predicted = Low TFS_Q9NQ03:155:286_2i13_A_1 2i13 155-286 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
155-177PF00096Zinc finger, C2H2 typeoverlaps 155-286
187-208PF00096Zinc finger, C2H2 typeoverlaps 155-286
212-234PF00096Zinc finger, C2H2 typeoverlaps 155-286
242-262PF00096Zinc finger, C2H2 typeoverlaps 155-286