Transcription factor

Q9NQX0 - PRDM6

Putative histone-lysine N-methyltransferase PRDM6 (EC 2.1.1.361) (PR domain zinc finger protein 6) (PR domain-containing protein 6)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 595 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3

Motif	Prediction	Source	DNA binding	Support	Actions
M08277_2.00	Known	CisBP	TTTTTTTTTTTTTTTTCTTTC	Direct PWM	Open · Scan
M08855_2.00	Known	CisBP	TTTTTTTCTTTTT	Direct PWM	Open · Scan
PRDM6_HUMAN.H11MO.0.C	Known	HOCOMOCO	AAAAAGAAAAAAA	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 595 aa

473-577

Residues: 105 aa
Domains: PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models: 1 active PDB
Templates: 2I13
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 473-5771 model

				Actions
Predicted = Low	TFS_Q9NQX0:473:577_2i13_A_1	2i13	473-577	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
256-375	PF21549	PR domain zinc finger protein 2, PR domain	No overlap with loaded model regions
501-523	PF00096	Zinc finger, C2H2 type	overlaps 473-577
529-551	PF00096	Zinc finger, C2H2 type	overlaps 473-577
557-578	PF00096	Zinc finger, C2H2 type	overlaps 473-577