ModCRE DB

Transcription factor

Q9NRE2 - TSHZ2

Teashirt homolog 2 (Ovarian cancer-related protein 10-2) (OVC10-2) (Zinc finger protein 218)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1034 aa

5 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3j_E_1 ModCRE Homology model AACCCGGCGTTT Region 211-238 · 1 3D model Open · Scan
TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3m_C_1 ModCRE Homology model CAACCCCCCCAGT Region 211-238 · 1 3D model Open · Scan
TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5wjq_D_1 ModCRE Homology model GCCACGCGCGTGA Region 211-238 · 1 3D model Open · Scan
TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e93_A_1 ModCRE Homology model TATCGGGGGT Region 926-950 · 1 3D model Open · Scan
TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e94_A_1 ModCRE Homology model TATCGGGGTT Region 926-950 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1034 aa
211-238
926-950

Region 211-238 3 PWM

Residues
28 aa
Domains
No overlapping PFAM annotation recorded
3D models
3 active PDBs · 3 summary rows
Templates
5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models

Region 926-950 2 PWM

Residues
25 aa
Domains
No overlapping PFAM annotation recorded
3D models
2 active PDBs · 2 summary rows
Templates
6E93, 6E94
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 211-2383 models · 3 summary rows
Actions
Predicted = Low TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3j_E_1 5v3j 211-238 View model · PDB
Predicted = Low TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3m_C_1 5v3m 211-238 View model · PDB
Predicted = Low TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5wjq_D_1 5wjq 211-238 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 5v3m 926:952 211 238 P:C · DNA:A,B 41.4% / 55.2% 10 View · PDB TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3m_C_1
4 5v3j 926:952 211 238 P:E · DNA:A,B 41.4% / 55.2% 10 View · PDB TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5v3j_E_1
5 5wjq 926:952 211 238 P:D · DNA:A,B 41.4% / 55.2% 10 View · PDB TFS_sp_Q9NRE2_TSH2_HUMAN:211:238_5wjq_D_1
Region 926-9502 models · 2 summary rows
Actions
Predicted = Low TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e93_A_1 6e93 926-950 View model · PDB
Predicted = Low TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e94_A_1 6e94 926-950 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6e93 926:952 926 950 P:A · DNA:C,D 44.0% / 60.0% 22 View · PDB TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e93_A_1
2 6e94 926:952 926 950 P:A · DNA:C,D 44.0% / 60.0% 22 View · PDB TFS_sp_Q9NRE2_TSH2_HUMAN:926:950_6e94_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
849-913PF26094Teashirt homolog 3-like, homeodomainNo overlap with loaded model regions