ModCRE DB

Transcription factor

Q9NT78 - DKFZp434G1930

Zinc finger protein 354C

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 319 aa

148 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M04480_2.00 NN 70+% CisBP ATTGATTACCCACCCTAC 72.4% identity Open · Scan
M08935_2.00 NN 70+% CisBP CCTCCTCCCTCAGACC 72.4% identity Open · Scan
Nearest Neighbor (70% - 40%)146
MotifPredictionSourceDNA bindingSupportLogoActions
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 68.9% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 68.9% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 68.2% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 67.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 67.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 65.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 65.5% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 65.5% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 65.5% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 65.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 64.2% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 61.0% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 60.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 60.9% identity Open · Scan
M00619_2.00 NN 70-40% CisBP TAAATCACGG 60.7% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 60.7% identity Open · Scan
M08977_2.00 NN 70-40% CisBP AAATCACAGC 60.7% identity Open · Scan
MA0038.1 NN 70-40% JASPAR CAAATCACTG 60.7% identity Open · Scan
MA0038.2 NN 70-40% JASPAR CAAATCACTGCA 60.7% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 60.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 59.3% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 59.2% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 58.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.6% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 58.6% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 58.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.4% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 58.0% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 57.8% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.7% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 57.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 57.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 57.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 57.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 57.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.1% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 57.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.9% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 56.9% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 56.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.9% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 56.6% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 56.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 56.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.4% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.3% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 56.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.8% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 55.8% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 55.7% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.6% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 55.5% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 55.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 55.3% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 55.2% identity Open · Scan
M04509_2.00 NN 70-40% CisBP GCCCCTCCCCCA 55.1% identity Open · Scan
MA1630.1 NN 70-40% JASPAR GGTGGGGGAGG 55.1% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 55.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 55.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 55.0% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 54.9% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 54.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 54.8% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 54.7% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 54.6% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 54.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.4% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.3% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.3% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 54.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 54.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.9% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 53.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.7% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.7% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 53.7% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.5% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 53.5% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.4% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 53.4% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.4% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 53.4% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 53.3% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 53.0% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 53.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 52.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.7% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 52.7% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.7% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 52.7% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 52.5% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.5% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.2% identity Open · Scan
M08870_2.00 NN 70-40% CisBP CCCCCCCCCCCCCCCCTCCCCC 52.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 52.0% identity Open · Scan
M01444_2.00 NN 70-40% CisBP CACTGCCAC 51.8% identity Open · Scan
M06050_2.00 NN 70-40% CisBP CACCTGT 51.8% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.8% identity Open · Scan
M08955_2.00 NN 70-40% CisBP GATCCTCCCGCCTCAGCCTCCC 51.8% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 51.7% identity Open · Scan
M06133_2.00 NN 70-40% CisBP CAGACCCCCCGCGGA 51.7% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 51.7% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 51.7% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 51.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 51.5% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 51.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 50.6% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.5% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.5% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.4% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.4% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 50.3% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 50.1% identity Open · Scan
M01468_2.00 NN 70-40% CisBP TTACCCCTGA 50.0% identity Open · Scan
M06051_2.00 NN 70-40% CisBP CACCTGC 50.0% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 50.0% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 50.0% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 319 aa
176-286

Region 176-286 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E94
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 176-2861 model
Actions
Predicted = Low TFS_Q9NT78:176:286_6e94_A_1 6e94 176-286 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
9-31PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
37-59PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
65-87PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
121-143PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
149-171PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
177-199PF00096Zinc finger, C2H2 typeoverlaps 176-286
219-244PF13465Zinc-finger double domainoverlaps 176-286
261-283PF00096Zinc finger, C2H2 typeoverlaps 176-286