ModCRE DB

Transcription factor

Q9NU39 - FOXD4L1

Forkhead box protein D4-like 1 (FOXD4-like 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 408 aa

51 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M10565_2.00 NN 70+% CisBP AAACAAACAATC 90.0% identity Open · Scan
MA0041.1 NN 70+% JASPAR GAATGTTTGTTT 89.8% identity Open · Scan
MA0031.1 NN 70+% JASPAR GTAAACAT 88.4% identity Open · Scan
M10570_2.00 NN 70+% CisBP CTTAAGTAAACAATGG 88.2% identity Open · Scan
M03741_2.00 NN 70+% CisBP TTATGTAAACAAT 83.8% identity Open · Scan
MA0847.1 NN 70+% JASPAR GTAAACA 79.0% identity Open · Scan
Nearest Neighbor (70% - 40%)45
MotifPredictionSourceDNA bindingSupportLogoActions
M01982_2.00 NN 70-40% CisBP TATGTAAACA 68.6% identity Open · Scan
MA0032.1 NN 70-40% JASPAR GGTAAGTA 68.6% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 67.3% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 67.3% identity Open · Scan
M09104_2.00 NN 70-40% CisBP CCTTGTTTACTTT 66.6% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 66.6% identity Open · Scan
M01990_2.00 NN 70-40% CisBP TTGTTTACA 65.8% identity Open · Scan
MA0148.1 NN 70-40% JASPAR TGTTTACTTTG 65.6% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 65.6% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 65.3% identity Open · Scan
M03735_2.00 NN 70-40% CisBP AAACAATAATATT 64.6% identity Open · Scan
MA0047.2 NN 70-40% JASPAR TGTTTACTTAGG 64.6% identity Open · Scan
MA0047.3 NN 70-40% JASPAR ATGTAAACATA 64.6% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 64.1% identity Open · Scan
MA0047.1 NN 70-40% JASPAR CAATATTTACTT 63.6% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 63.2% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 62.5% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 62.5% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 61.6% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 61.4% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 61.1% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 61.1% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 60.7% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 60.7% identity Open · Scan
M03058_2.00 NN 70-40% CisBP GTAAACATAAACA 60.5% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 60.2% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 60.2% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 60.1% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 59.4% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 59.1% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 57.4% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 56.7% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 56.7% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 56.6% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 55.0% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 53.4% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 53.1% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 53.1% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 52.0% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 51.3% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 51.2% identity Open · Scan
M01016_2.00 NN 70-40% CisBP TGGACGCTAA 51.2% identity Open · Scan
M01227_2.00 NN 70-40% CisBP GTAAACAA 50.0% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 50.0% identity Open · Scan
MA1489.1 NN 70-40% JASPAR GTAAACAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 408 aa
107-173

Region 107-173 0 PWM

Residues
67 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 107-1731 model
Actions
Predicted = Low DIMER_Q9NU39:107:173_2a07_F_1 2a07 107-173 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
107-191PF00250Forkhead domainoverlaps 107-173