ModCRE DB

Transcription factor

Q9NX45 - SOHLH2

Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 425 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1560.1 Known JASPAR CGCACGTGCA Direct PWM Open · Scan
MA1560.2 Known JASPAR GCACGTGC Direct PWM Open · Scan
M01113_2.00 Known CisBP GCACGTGCT Direct PWM Open · Scan
M04096_2.00 Known CisBP CGCACGTGCA Direct PWM Open · Scan
M04097_2.00 Known CisBP AGCACGTGCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 425 aa
198-254

Region 198-254 0 PWM

Residues
57 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
4H10
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 198-2541 model
Actions
Predicted = Low DIMER_Q9NX45:198:254_4h10_B_1 4h10 198-254 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
206-252PF00010Helix-loop-helix DNA-binding domainoverlaps 198-254