ModCRE DB

Transcription factor

Q9NX65 - ZSCAN32

Zinc finger and SCAN domain-containing protein 32 (Human cervical cancer suppressor gene 5 protein) (HCCS-5) (Zinc finger protein 434)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 697 aa

109 Generated PWM 9 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)101
MotifPredictionSourceDNA bindingSupportLogoActions
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 69.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 69.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 69.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 69.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 66.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 66.6% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 66.6% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.2% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 61.1% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 60.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.2% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 57.8% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.5% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 57.2% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 56.9% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 56.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 56.4% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 56.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 56.0% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.0% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 55.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 55.9% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 55.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M04483_2.00 NN 70-40% CisBP ATGCACACACTGAAAAA 55.7% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 55.1% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 55.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 55.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.0% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 54.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 54.8% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 54.8% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 54.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 54.7% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 54.6% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 54.6% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 54.4% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 54.3% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 54.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.3% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 53.8% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.7% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.6% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.6% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 53.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.1% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.1% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 53.0% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.9% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 52.7% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 52.7% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 52.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 52.5% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 52.4% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 52.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.1% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 52.0% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.0% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 51.9% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.8% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 51.8% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.8% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 51.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 51.6% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 51.3% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.3% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 51.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 51.0% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 51.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 51.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 51.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.9% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 50.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 50.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.6% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 50.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 50.5% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 50.2% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.0% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 50.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M01540_2.00 NN 70-40% CisBP CTCCCCC 50.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
M09002_2.00 NN 70-40% CisBP CCACCTGG 50.0% identity Open · Scan
M10391_2.00 NN 70-40% CisBP TACCCCACATTTATTTA 50.0% identity Open · Scan
ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3j_E_1 ModCRE Homology model TTCCGGGGGGGGCGGCGGGGGG Region 476-683 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3m_C_1 ModCRE Homology model TCCGGCGGGCGGGGGGGGGGCC Region 476-683 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:518:628_5egb_A_1 ModCRE Homology model CCGGGGACAGGAGGTGGG Region 518-628 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:518:628_5ei9_E_1 ModCRE Homology model CCCGGGGGGTGGGGCGC Region 518-628 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:518:683_5wjq_D_1 ModCRE Homology model GGGGTGAGGCGCCGCCGGTGCCTG Region 518-683 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:530:683_2i13_A_1 ModCRE Homology model ATTTTTCTTCTCAAGAGTTAT Region 530-683 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:574:683_2jp9_A_1 ModCRE Homology model GGGGGGGAGGAGTCCCG Region 574-683 · 1 3D model Open · Scan
TFS_sp_Q9NX65_ZSC32_HUMAN:574:683_2jpa_A_1 ModCRE Homology model GGGGGGGGAGTCCC Region 574-683 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 697 aa
476-683

Region 476-683 8 PWM

Residues
208 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
9 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 2JPA, 5EGB, 5EI9, 5V3J, 5V3M, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
9 active PDB models 6 summary rows
Region 476-6839 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q9NX65_ZSC32_HUMAN:575:626_1llm_D_1 1llm 575-626 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3j_E_1 5v3j 476-683 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3m_C_1 5v3m 476-683 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:518:628_5egb_A_1 5egb 518-628 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:518:628_5ei9_E_1 5ei9 518-628 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:518:683_5wjq_D_1 5wjq 518-683 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:530:683_2i13_A_1 2i13 530-683 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:574:683_2jp9_A_1 2jp9 574-683 View model · PDB
Predicted = Low TFS_sp_Q9NX65_ZSC32_HUMAN:574:683_2jpa_A_1 2jpa 574-683 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 476:685 518 628 P:E · DNA:A,B 57.7% / 72.1% 100 View · PDB TFS_sp_Q9NX65_ZSC32_HUMAN:518:628_5ei9_E_1
1 2i13 476:685 530 683 P:A · DNA:C,D 55.8% / 70.1% 100 View · PDB TFS_sp_Q9NX65_ZSC32_HUMAN:530:683_2i13_A_1
2 5wjq 476:685 518 683 P:D · DNA:A,B 50.6% / 66.9% 58 View · PDB TFS_sp_Q9NX65_ZSC32_HUMAN:518:683_5wjq_D_1
3 5v3m 476:685 476 683 P:C · DNA:A,B 46.9% / 60.3% 74 View · PDB TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3m_C_1
4 5v3j 476:685 476 683 P:E · DNA:A,B 46.9% / 60.3% 74 View · PDB TFS_sp_Q9NX65_ZSC32_HUMAN:476:683_5v3j_E_1
1 1llm 476:685 575,575 626,626 P:C,D · DNA:A,B 46.2% / 67.3% 59,61 View · PDB DIMER_sp_Q9NX65_ZSC32_HUMAN:575:626_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
33-121PF02023SCAN domainNo overlap with loaded model regions
255-338PF13837Myb/SANT-like DNA-binding domainNo overlap with loaded model regions
522-543PF00096Zinc finger, C2H2 typeoverlaps 476-683
549-571PF00096Zinc finger, C2H2 typeoverlaps 476-683
577-599PF00096Zinc finger, C2H2 typeoverlaps 476-683
605-627PF00096Zinc finger, C2H2 typeoverlaps 476-683
633-655PF00096Zinc finger, C2H2 typeoverlaps 476-683
661-683PF00096Zinc finger, C2H2 typeoverlaps 476-683