ModCRE DB

Transcription factor

Q9NY43 - BARHL2

BarH-like 2 homeobox protein

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 387 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0635.1 Known JASPAR GCTAAACGGT Direct PWM Open · Scan
MA0635.2 Known JASPAR TAAACG Direct PWM Open · Scan
M03157_2.00 Known CisBP GTTAAACGGT Direct PWM Open · Scan
M03158_2.00 Known CisBP GTTAATTGCT Direct PWM Open · Scan
M03159_2.00 Known CisBP TAATTGGTGTTAAATG Direct PWM Open · Scan
M03160_2.00 Known CisBP GCTAAACGGT Direct PWM Open · Scan
M03161_2.00 Known CisBP GCTAATTGCT Direct PWM Open · Scan
M03162_2.00 Known CisBP TAATTGGTGCTAATTG Direct PWM Open · Scan
M05164_2.00 Known CisBP CTAAACGGT Direct PWM Open · Scan
M05165_2.00 Known CisBP CTAATTGCT Direct PWM Open · Scan
M05166_2.00 Known CisBP CTAATTGCT Direct PWM Open · Scan
M05167_2.00 Known CisBP CTAAACGG Direct PWM Open · Scan
M05168_2.00 Known CisBP CTAATTGC Direct PWM Open · Scan
M05169_2.00 Known CisBP CTAATTGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 387 aa
231-290

Region 231-290 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 231-2901 model
Actions
Predicted = Low DIMER_Q9NY43:231:290_1fjl_A_1 1fjl 231-290 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
233-289PF00046Homeodomainoverlaps 231-290