Region 306-326 0 PWM
- Residues
- 21 aa
- Domains
- PF18016 · SAM domain (Sterile alpha motif)
- 3D models
- 1 active PDB
- Templates
- 6FQP
- Sources
- Structure model
Transcription factor
Q9NZI6 - TFCP2L1
Transcription factor CP2-like protein 1 (CP2-related transcriptional repressor 1) (CRTR-1) (Transcription factor LBP-9)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 479 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04886_2.00 | Known | CisBP | ACCGGTTCGAACCGGT | Direct PWM | Open · Scan | |
| M04885_2.00 | Known | CisBP | ACCGGTTCGAACCGGT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
479 aa
306-326
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 306-3261 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_Q9NZI6:306:326_6fqp_A_1 | 6fqp | 306-326 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 45-238 | PF04516 | CP2 transcription factor | No overlap with loaded model regions |
| 305-362 | PF18016 | SAM domain (Sterile alpha motif) | overlaps 306-326 |
| 398-476 | PF25416 | GRHL1-like, C-terminal domain | No overlap with loaded model regions |