Transcription factor

Q9NZI7 - UBP1

Upstream-binding protein 1 (Transcription factor LBP-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 540 aa

2 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M04893_2.00	Known	CisBP	AACCGGTTCGAACCGGTT	Direct PWM		Open · Scan
M04894_2.00	Known	CisBP	AACCGGTTTAAACCGGTT	Direct PWM		Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 540 aa

64-253

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 64-2531 model

				Actions
Predicted = Low	TFS_Q9NZI7:64:253_5mpf_A_1	5mpf	64-253	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
55-255	PF04516	CP2 transcription factor	overlaps 64-253
362-422	PF18016	SAM domain (Sterile alpha motif)	No overlap with loaded model regions
464-540	PF25416	GRHL1-like, C-terminal domain	No overlap with loaded model regions