ModCRE DB

Transcription factor

Q9P0L1 - ZKSCAN7

Zinc finger protein with KRAB and SCAN domains 7 (Zinc finger protein 167) (Zinc finger protein 448) (Zinc finger protein 64)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 754 aa

118 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M05856_2.00 Known CisBP ACAAACTGTAGAGTGCT Direct PWM Open · Scan
Nearest Neighbor (>70%)7
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70+% CisBP CCACCTCA 72.9% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 72.9% identity Open · Scan
M00953_2.00 NN 70+% CisBP ATCTATAT 71.7% identity Open · Scan
M00960_2.00 NN 70+% CisBP TGCATCCC 71.7% identity Open · Scan
M00943_2.00 NN 70+% CisBP CCCGCTGC 70.5% identity Open · Scan
M00944_2.00 NN 70+% CisBP TCGCTATAA 70.5% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)110
MotifPredictionSourceDNA bindingSupportLogoActions
M00948_2.00 NN 70-40% CisBP GCAGCACC 69.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 69.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 68.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 64.7% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 64.3% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 64.1% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 63.9% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 63.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 63.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 63.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 62.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 62.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 62.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 62.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 62.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 61.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 60.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 60.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 60.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 60.3% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 60.1% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 59.7% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 59.7% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 59.5% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 59.1% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 59.1% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 59.0% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 58.9% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 58.9% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 58.8% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 58.7% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 58.6% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 58.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.9% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 57.7% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 57.6% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 57.5% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 57.4% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 57.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 57.2% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 57.1% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 57.1% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 57.1% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 57.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 56.8% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 56.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.6% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 56.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.1% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 56.0% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 55.8% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 55.5% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 55.3% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 55.2% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 55.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 54.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 54.6% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 54.6% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 54.6% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 54.4% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 54.2% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.2% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 54.1% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 53.7% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 53.7% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 53.3% identity Open · Scan
M00147_2.00 NN 70-40% CisBP TGTGTGCAC 53.1% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 53.1% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 53.1% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 53.0% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.9% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 52.9% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.9% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 52.6% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 52.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 52.5% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 52.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.3% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 52.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 52.1% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 52.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 51.8% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.6% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 51.4% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.2% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.2% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.9% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.7% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 50.6% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.5% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 50.5% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.3% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 50.2% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 50.1% identity Open · Scan
MA1593.1 NN 70-40% JASPAR TAACAGCAGACT 50.1% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 754 aa
380-658

Region 380-658 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 380-6581 model
Actions
Predicted = Low TFS_Q9P0L1:380:658_5wjq_D_1 5wjq 380-658 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
51-136PF02023SCAN domainNo overlap with loaded model regions
231-270PF01352KRAB boxNo overlap with loaded model regions
383-405PF00096Zinc finger, C2H2 typeoverlaps 380-658
411-433PF00096Zinc finger, C2H2 typeoverlaps 380-658
439-461PF00096Zinc finger, C2H2 typeoverlaps 380-658
467-489PF00096Zinc finger, C2H2 typeoverlaps 380-658
495-517PF00096Zinc finger, C2H2 typeoverlaps 380-658
523-545PF00096Zinc finger, C2H2 typeoverlaps 380-658
551-573PF00096Zinc finger, C2H2 typeoverlaps 380-658
579-601PF00096Zinc finger, C2H2 typeoverlaps 380-658
607-629PF00096Zinc finger, C2H2 typeoverlaps 380-658
635-657PF00096Zinc finger, C2H2 typeoverlaps 380-658
663-685PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
691-713PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
719-741PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions