ModCRE DB

Transcription factor

Q9P2J8 - ZNF624

Zinc finger protein 624

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 865 aa

66 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)60
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 67.0% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.4% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 61.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 60.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 57.4% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.3% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 57.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.4% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 56.2% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 56.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.9% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.4% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 55.3% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.3% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.1% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.1% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 54.6% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 54.4% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 53.1% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.8% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 52.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.7% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.4% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 51.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 50.9% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 50.8% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 50.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.2% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 50.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q9P2J8_ZN624_HUMAN:722:763_1llm_D_1 ModCRE Homology model CTGGCGCGCGGG Region 722-763 · 1 3D model Open · Scan
TFS_sp_Q9P2J8_ZN624_HUMAN:276:355_2kmk_A_1 ModCRE Homology model AGGCTGAAGTAAAAAA Region 276-355 · 1 3D model Open · Scan
TFS_sp_Q9P2J8_ZN624_HUMAN:309:410_2jp9_A_1 ModCRE Homology model GGGGGGGGCCGACCCCC Region 309-410 · 1 3D model Open · Scan
TFS_sp_Q9P2J8_ZN624_HUMAN:329:439_5egb_A_1 ModCRE Homology model CGCCGGGGGGGGACCCGG Region 329-439 · 1 3D model Open · Scan
TFS_sp_Q9P2J8_ZN624_HUMAN:329:439_5ei9_E_1 ModCRE Homology model GACGGGTGGGGGGCCCC Region 329-439 · 1 3D model Open · Scan
TFS_sp_Q9P2J8_ZN624_HUMAN:331:439_5eh2_F_1 ModCRE Homology model GGGGGCAGGGGGGTCCCCC Region 331-439 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 865 aa
276-803

Region 276-803 6 PWM

Residues
528 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 2JP9, 2KMK, 5EGB, 5EH2, 5EI9, 5V3J, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 276-80311 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_Q9P2J8_ZN624_HUMAN:722:763_1llm_D_1 1llm 722-763 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:276:355_2kmk_A_1 2kmk 276-355 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:291:438_2i13_A_1 2i13 291-438 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:303:579_5v3j_E_1 5v3j 303-579 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:303:579_5v3m_C_1 5v3m 303-579 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:309:410_2jp9_A_1 2jp9 309-410 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:329:439_5egb_A_1 5egb 329-439 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:329:439_5ei9_E_1 5ei9 329-439 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:331:439_5eh2_F_1 5eh2 331-439 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:416:714_7w1m_H_1 7w1m 416-714 View model · PDB
Predicted = Low TFS_sp_Q9P2J8_ZN624_HUMAN:525:803_5wjq_D_1 5wjq 525-803 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 265:828 291 438 P:A · DNA:C,D 61.5% / 73.0% 96 View · PDB TFS_sp_Q9P2J8_ZN624_HUMAN:291:438_2i13_A_1
1 5wjq 265:828 525 803 P:D · DNA:A,B 54.8% / 70.3% 99 View · PDB TFS_sp_Q9P2J8_ZN624_HUMAN:525:803_5wjq_D_1
2 5v3m 265:828 303 579 P:C · DNA:A,B 53.8% / 70.4% 100 View · PDB TFS_sp_Q9P2J8_ZN624_HUMAN:303:579_5v3m_C_1
3 5v3j 265:828 303 579 P:E · DNA:A,B 53.8% / 70.4% 100 View · PDB TFS_sp_Q9P2J8_ZN624_HUMAN:303:579_5v3j_E_1
1 1llm 265:828 722,722 763,763 P:C,D · DNA:A,B 50.0% / 71.4% 48,49 View · PDB DIMER_sp_Q9P2J8_ZN624_HUMAN:722:763_1llm_D_1
5 7w1m 265:828 416 714 P:H · DNA:F,G 35.4% / 54.5% 92 View · PDB TFS_sp_Q9P2J8_ZN624_HUMAN:416:714_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
53-94PF01352KRAB boxNo overlap with loaded model regions
276-298PF00096Zinc finger, C2H2 typeoverlaps 276-803
304-326PF00096Zinc finger, C2H2 typeoverlaps 276-803
332-354PF00096Zinc finger, C2H2 typeoverlaps 276-803
360-381PF00096Zinc finger, C2H2 typeoverlaps 276-803
388-410PF00096Zinc finger, C2H2 typeoverlaps 276-803
416-438PF00096Zinc finger, C2H2 typeoverlaps 276-803
444-466PF00096Zinc finger, C2H2 typeoverlaps 276-803
472-494PF00096Zinc finger, C2H2 typeoverlaps 276-803
500-522PF00096Zinc finger, C2H2 typeoverlaps 276-803
528-550PF00096Zinc finger, C2H2 typeoverlaps 276-803
556-578PF00096Zinc finger, C2H2 typeoverlaps 276-803
584-606PF00096Zinc finger, C2H2 typeoverlaps 276-803
612-634PF00096Zinc finger, C2H2 typeoverlaps 276-803
640-662PF00096Zinc finger, C2H2 typeoverlaps 276-803
668-690PF00096Zinc finger, C2H2 typeoverlaps 276-803
696-718PF00096Zinc finger, C2H2 typeoverlaps 276-803
724-746PF00096Zinc finger, C2H2 typeoverlaps 276-803
752-774PF00096Zinc finger, C2H2 typeoverlaps 276-803
780-802PF00096Zinc finger, C2H2 typeoverlaps 276-803
808-830PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
836-858PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions