Region 99-164 2 PWM
- Residues
- 66 aa
- Domains
- PF00447 · HSF-type DNA-binding
- 3D models
- 8 active PDBs · 5 summary rows
- Templates
- 5D5V, 5D8L, 5HDN, 7DCU
- Sources
- Predicted = Low
Transcription factor
Q9UBD0 - HSFX1
Heat shock transcription factor, X-linked
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 423 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d5v_B_1 | ModCRE | Homology model | CTGTCTAGAACC | Region 99-164 · 1 3D model | Open · Scan | |
| TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d5v_D_1 | ModCRE | Homology model | GGGAAACCCGTG | Region 99-164 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
423 aa
99-164
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 99-1648 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d5v_B_1 | 5d5v | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d5v_D_1 | 5d5v | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d8l_B_1 | 5d8l | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d8l_D_1 | 5d8l | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5hdn_B_1 | 5hdn | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_A_1 | 7dcu | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_B_1 | 7dcu | 99-164 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_C_1 | 7dcu | 99-164 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7dcu | 99:166 | 99 | 164 | P:B · DNA:D,E | 41.2% / 55.9% | 59 | View · PDB TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_B_1 |
| 2 | 5d8l | 99:166 | 99 | 164 | P:D · DNA:A,C | 41.2% / 55.9% | 62 | View · PDB TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d8l_D_1 |
| 3 | 5d8l | 99:166 | 99 | 164 | P:B · DNA:A,C | 41.2% / 55.9% | 57 | View · PDB TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_5d8l_B_1 |
| 4 | 7dcu | 99:166 | 99 | 164 | P:C · DNA:D,E | 41.2% / 55.9% | 66 | View · PDB TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_C_1 |
| 5 | 7dcu | 99:166 | 99 | 164 | P:A · DNA:D,E | 41.2% / 55.9% | 60 | View · PDB TFS_sp_Q9UBD0_HSFX1_HUMAN:99:164_7dcu_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 99-211 | PF00447 | HSF-type DNA-binding | overlaps 99-164 |