ModCRE DB

Transcription factor

Q9UC07 - ZNF69

Zinc finger protein 69 (hZNF3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 566 aa

38 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07744_2.00 Known CisBP GCACAGCGCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M07628_2.00 NN 70+% CisBP AGTGGTTCTGCTTCT 91.4% identity Open · Scan
M07627_2.00 NN 70+% CisBP CAGTCACCTTCTGG 82.5% identity Open · Scan
Nearest Neighbor (70% - 40%)35
MotifPredictionSourceDNA bindingSupportLogoActions
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 64.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.9% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 61.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 58.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 58.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 56.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 56.4% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 56.3% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 56.2% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 56.0% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 55.2% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 55.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.6% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 53.8% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 53.7% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 52.5% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 51.9% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.5% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.1% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 51.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.9% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 50.8% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 50.8% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.2% identity Open · Scan
M01868_2.00 NN 70-40% CisBP TCTTGGCG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 566 aa
219-329

Region 219-329 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E93
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 219-3291 model
Actions
Predicted = Low TFS_Q9UC07:219:329_6e93_A_1 6e93 219-329 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
23-64PF01352KRAB boxNo overlap with loaded model regions
192-214PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
248-270PF00096Zinc finger, C2H2 typeoverlaps 219-329
276-298PF00096Zinc finger, C2H2 typeoverlaps 219-329
304-326PF00096Zinc finger, C2H2 typeoverlaps 219-329
332-354PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
360-382PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
388-410PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
416-438PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
444-468PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
478-500PF13894C2H2-type zinc fingerNo overlap with loaded model regions
506-528PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
534-556PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions