ModCRE DB

Transcription factor

Q9UH73 - EBF1

Transcription factor COE1 (O/E-1) (OE-1) (Early B-cell factor)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 591 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0154.1 Known JASPAR ACCCAAGGGA Direct PWM Open · Scan
MA0154.2 Known JASPAR GTCCCCAGGGA Direct PWM Open · Scan
MA0154.3 Known JASPAR ATTCCCAAGGGAAT Direct PWM Open · Scan
MA0154.4 Known JASPAR AGTCCCCAGGGGACT Direct PWM Open · Scan
MA0154.5 Known JASPAR TCCCCAGGGGA Direct PWM Open · Scan
M02963_2.00 Known CisBP ATTCCCTTGGGAAT Direct PWM Open · Scan
M09044_2.00 Known CisBP GGTCCCTGGGGACTT Direct PWM Open · Scan
COE1_HUMAN.H11MO.0.A Known HOCOMOCO AAGTCCCCAGGGACC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 591 aa
349-389

Region 349-389 0 PWM

Residues
41 aa
Domains
PF16423 · Transcription factor COE1 helix-loop-helix domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 349-3891 model
Actions
Predicted = Low TFS_Q9UH73:349:389_2ypb_A_1 2ypb 349-389 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
19-247PF16422Transcription factor COE1 DNA-binding domainNo overlap with loaded model regions
262-342PF01833IPT/TIG domainNo overlap with loaded model regions
347-390PF16423Transcription factor COE1 helix-loop-helix domainoverlaps 349-389