ModCRE DB

Transcription factor

Q9UIE0 - ZNF230

Zinc finger protein 230 (Zinc finger protein FDZF2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 474 aa

31 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07654_2.00 NN 70+% CisBP TGCCCCCTGGTGGC 78.3% identity Open · Scan
Nearest Neighbor (70% - 40%)30
MotifPredictionSourceDNA bindingSupportLogoActions
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 62.5% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 59.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 59.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 59.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 57.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 57.8% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 57.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 56.6% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 56.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 55.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.9% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 55.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 55.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 53.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.6% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 53.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.1% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 51.6% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 50.4% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 474 aa
165-442

Region 165-442 0 PWM

Residues
278 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 165-4421 model
Actions
Predicted = Low TFS_Q9UIE0:165:442_5wjq_D_1 5wjq 165-442 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
168-190PF00096Zinc finger, C2H2 typeoverlaps 165-442
252-274PF00096Zinc finger, C2H2 typeoverlaps 165-442
280-302PF00096Zinc finger, C2H2 typeoverlaps 165-442
336-358PF00096Zinc finger, C2H2 typeoverlaps 165-442
364-386PF00096Zinc finger, C2H2 typeoverlaps 165-442
392-414PF00096Zinc finger, C2H2 typeoverlaps 165-442