ModCRE DB

Transcription factor

Q9UIF8 - BAZ2B

Bromodomain adjacent to zinc finger domain protein 2B (hWALp4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 2168 aa

8 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1a6y_A_1 ModCRE Homology model TAGGGGGTCAAAGGGGCCA Region 1745-1777 · 1 3D model Open · Scan
DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1ga5_B_1 ModCRE Homology model TAAGGGTGACAGGGGAACC Region 1745-1777 · 1 3D model Open · Scan
DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1hlz_B_1 ModCRE Homology model AAAGGGGTCCAAAGGGAAC Region 1745-1777 · 1 3D model Open · Scan
TFS_sp_Q9UIF8_BAZ2B_HUMAN:736:843_7mwl_A_1 ModCRE Homology model GGGCCCCA Region 736-843 · 1 3D model Open · Scan
TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_A_1 ModCRE Homology model TGGTATTA Region 737-841 · 1 3D model Open · Scan
TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_B_1 ModCRE Homology model AAATTC Region 737-841 · 1 3D model Open · Scan
TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_A_1 ModCRE Homology model AGTACCTA Region 737-841 · 1 3D model Open · Scan
TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_B_1 ModCRE Homology model AAATTT Region 737-841 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 2168 aa
736-843
1745-1777

Region 736-843 5 PWM

Residues
108 aa
Domains
PF01429 · Methyl-CpG binding domain
3D models
5 active PDBs · 5 summary rows
Templates
7FHJ, 7MWH, 7MWL
Sources
Predicted = Low
Scan this region Show models

Region 1745-1777 3 PWM

Residues
33 aa
Domains
No overlapping PFAM annotation recorded
3D models
3 active PDBs · 3 summary rows
Templates
1A6Y, 1GA5, 1HLZ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 8 summary rows
Region 736-8435 models · 5 summary rows
Actions
Predicted = Low TFS_sp_Q9UIF8_BAZ2B_HUMAN:736:843_7mwl_A_1 7mwl 736-843 View model · PDB
Predicted = Low TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_A_1 7fhj 737-841 View model · PDB
Predicted = Low TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_B_1 7fhj 737-841 View model · PDB
Predicted = Low TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_A_1 7mwh 737-841 View model · PDB
Predicted = Low TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_B_1 7mwh 737-841 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 7mwl 736:843 736 843 P:A · DNA:E,F 51.9% / 74.1% 100 View · PDB TFS_sp_Q9UIF8_BAZ2B_HUMAN:736:843_7mwl_A_1
2 7mwh 736:843 737 841 P:B · DNA:C,D 51.4% / 74.3% 99 View · PDB TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_B_1
3 7mwh 736:843 737 841 P:A · DNA:C,D 51.4% / 74.3% 99 View · PDB TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7mwh_A_1
4 7fhj 736:843 737 841 P:B · DNA:C,D 51.4% / 74.3% 99 View · PDB TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_B_1
5 7fhj 736:843 737 841 P:A · DNA:C,D 51.4% / 74.3% 99 View · PDB TFS_sp_Q9UIF8_BAZ2B_HUMAN:737:841_7fhj_A_1
Region 1745-17773 models · 3 summary rows
Actions
Predicted = Low DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1a6y_A_1 1a6y 1745-1777 View model · PDB
Predicted = Low DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1ga5_B_1 1ga5 1745-1777 View model · PDB
Predicted = Low DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1hlz_B_1 1hlz 1745-1777 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1a6y 736:843 1745,1745 1777,1777 P:A,B · DNA:C,D 33.3% / 66.7% 39,36 View · PDB DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1a6y_A_1
2 1ga5 736:843 1745,1745 1777,1777 P:A,B · DNA:C,D 33.3% / 66.7% 37,39 View · PDB DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1ga5_B_1
3 1hlz 736:843 1745,1745 1777,1777 P:A,B · DNA:C,D 33.3% / 66.7% 38,38 View · PDB DIMER_sp_Q9UIF8_BAZ2B_HUMAN:1745:1777_1hlz_B_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
740-812PF01429Methyl-CpG binding domainoverlaps 736-843
1089-1149PF02791DDT domainNo overlap with loaded model regions
1373-1416PF15613Williams-Beuren syndrome DDT (WSD), D-TOX E motifNo overlap with loaded model regions
1934-1978PF00628PHD-fingerNo overlap with loaded model regions
2069-2148PF00439BromodomainNo overlap with loaded model regions