ModCRE DB

Transcription factor

Q9UII5 - ZNF107

Zinc finger protein 107 (Zinc finger protein 588) (Zinc finger protein ZFD25)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 783 aa

96 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 77.6% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 75.1% identity Open · Scan
M08381_2.00 NN 70+% CisBP ACATTTTGTCCTCCTAGTCCT 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)93
MotifPredictionSourceDNA bindingSupportLogoActions
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 66.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.4% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 63.8% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 63.6% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 63.5% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 63.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.0% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 63.0% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 62.7% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.3% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 62.3% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 61.9% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 61.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.7% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 60.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 60.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 59.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 58.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 58.9% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 58.8% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 58.5% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.4% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 57.5% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 57.0% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 56.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 56.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 56.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 56.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 56.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.0% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 54.5% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.5% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 53.5% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 53.2% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 53.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.1% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 53.0% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.8% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 52.8% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 52.8% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 52.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.4% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 52.3% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 52.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.0% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 52.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 52.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 51.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 51.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.8% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 51.6% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 51.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.3% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 51.0% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 51.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.9% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 50.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 50.7% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 50.6% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.4% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 50.2% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 50.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 50.1% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.0% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 50.0% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 50.0% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 50.0% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 50.0% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 50.0% identity Open · Scan
MA1646.1 NN 70-40% JASPAR AAACAGAAGCAG 50.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 783 aa
213-491

Region 213-491 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 213-4911 model
Actions
Predicted = Low TFS_Q9UII5:213:491_5wjq_D_1 5wjq 213-491 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
104-126PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
132-154PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
160-182PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
189-210PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
244-266PF00096Zinc finger, C2H2 typeoverlaps 213-491
328-350PF00096Zinc finger, C2H2 typeoverlaps 213-491
356-378PF00096Zinc finger, C2H2 typeoverlaps 213-491
384-404PF00096Zinc finger, C2H2 typeoverlaps 213-491
412-434PF00096Zinc finger, C2H2 typeoverlaps 213-491
440-462PF00096Zinc finger, C2H2 typeoverlaps 213-491
468-490PF00096Zinc finger, C2H2 typeoverlaps 213-491
496-518PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
608-630PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
636-658PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
664-686PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
692-714PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
720-742PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions