ModCRE DB

Transcription factor

Q9UIW0 - VAX2

Ventral anterior homeobox 2

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 290 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0723.1 Known JASPAR CTAATTAC Direct PWM Open · Scan
MA0723.2 Known JASPAR GTAATTAG Direct PWM Open · Scan
MA0723.3 Known JASPAR TAATTA Direct PWM Open · Scan
M00283_2.00 Known CisBP GCTAATGGGC Direct PWM Open · Scan
M00284_2.00 Known CisBP GCTAATTG Direct PWM Open · Scan
M03119_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M05030_2.00 Known CisBP CTAATTAG Direct PWM Open · Scan
M05031_2.00 Known CisBP CTAATTAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 290 aa
103-163

Region 103-163 0 PWM

Residues
61 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 103-1631 model
Actions
Predicted = Low DIMER_Q9UIW0:103:163_5zjr_A_1 5zjr 103-163 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
103-159PF00046Homeodomainoverlaps 103-163