ModCRE DB

Transcription factor

Q9UJQ4 - SALL4

Sal-like protein 4 (Zinc finger protein 797) (Zinc finger protein SALL4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1053 aa

23 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known2
MotifPredictionSourceDNA bindingSupportLogoActions
M08866_2.00 Known CisBP CCCACCCTCC Direct PWM Open · Scan
SALL4_HUMAN.H11MO.0.B Known HOCOMOCO GGAGGGTGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08979_2.00 NN 70+% CisBP CCCACCCTCC 97.1% identity Open · Scan
Nearest Neighbor (70% - 40%)20
MotifPredictionSourceDNA bindingSupportLogoActions
M09002_2.00 NN 70-40% CisBP CCACCTGG 59.1% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 58.8% identity Open · Scan
M03690_2.00 NN 70-40% CisBP AACCACCTGTTA 57.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.6% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 54.7% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 54.7% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 54.7% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 54.3% identity Open · Scan
M08397_2.00 NN 70-40% CisBP ATGCAACAGGTG 53.7% identity Open · Scan
MA0743.1 NN 70-40% JASPAR GAGCAACAGGTGGTT 53.7% identity Open · Scan
MA0744.1 NN 70-40% JASPAR ATGCAACAGGTGG 53.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 52.8% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 52.3% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 52.3% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 51.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 50.9% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 50.0% identity Open · Scan
M03691_2.00 NN 70-40% CisBP ATGCAACAGGTGG 50.0% identity Open · Scan
M06087_2.00 NN 70-40% CisBP ACCACCTGTTGCA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1053 aa
565-650

Region 565-650 0 PWM

Residues
86 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
6E93
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 565-6501 model
Actions
Predicted = Low TFS_Q9UJQ4:565:650_6e93_A_1 6e93 565-650 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
382-404PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
410-432PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
594-616PF00096Zinc finger, C2H2 typeoverlaps 565-650
626-648PF00096Zinc finger, C2H2 typeoverlaps 565-650
872-892PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
898-920PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions