Transcription factor

Q9UJW7 - ZNF229

Zinc finger protein 229

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 825 aa

133 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)124

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	67.0% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	65.8% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	65.8% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	65.8% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	65.8% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	65.8% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	64.7% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	64.7% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	63.7% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	63.5% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	62.3% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	62.3% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	62.3% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	61.4% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	61.2% identity		Open · Scan
M07613_2.00	NN 70-40%	CisBP	TCACTCAGTCATTCA	60.5% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	59.6% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	59.6% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	59.1% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	58.6% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	58.3% identity		Open · Scan
M08887_2.00	NN 70-40%	CisBP	CCTCCTCCAGGAAGCCTTCCCTGA	58.1% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	57.9% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	57.2% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.0% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	56.9% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	56.8% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	56.8% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	56.8% identity		Open · Scan
M07764_2.00	NN 70-40%	CisBP	CTGCACTCTCCCCTTCCCCCCCTCCCC	56.7% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	56.3% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	56.3% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	56.3% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	56.0% identity		Open · Scan
M07715_2.00	NN 70-40%	CisBP	CCGCCGCCGCCGTGG	56.0% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	55.9% identity		Open · Scan
M07687_2.00	NN 70-40%	CisBP	ACAAATAAGGTTCTTGTGCCCCCTGCT	55.9% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	55.8% identity		Open · Scan
MA1597.1	NN 70-40%	JASPAR	CCCAGGGAAGCCATTTC	55.7% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	55.6% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	55.5% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	55.4% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	55.4% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	55.2% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	55.2% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	55.1% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	55.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	54.9% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	54.8% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	54.7% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	54.5% identity		Open · Scan
M07562_2.00	NN 70-40%	CisBP	GAAAAAAAC	54.3% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	54.3% identity		Open · Scan
M07754_2.00	NN 70-40%	CisBP	CGCCCCCTCCCT	54.3% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	54.2% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	54.1% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	53.8% identity		Open · Scan
M07658_2.00	NN 70-40%	CisBP	CCGCCGCAGCCGCCG	53.8% identity		Open · Scan
M07701_2.00	NN 70-40%	CisBP	CCTGGGCTAGGCCCTGGC	53.7% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	53.6% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	53.6% identity		Open · Scan
M08330_2.00	NN 70-40%	CisBP	TGGGTGCCGGACTGCTGTTCC	53.6% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	53.6% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	53.5% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	53.5% identity		Open · Scan
M07657_2.00	NN 70-40%	CisBP	CCCCTGCATGTCCCCATTTTT	53.5% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	53.3% identity		Open · Scan
M07646_2.00	NN 70-40%	CisBP	CTTTTTTTT	53.2% identity		Open · Scan
MA1600.1	NN 70-40%	JASPAR	ATACAGTCCACCCCTTTA	53.2% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	53.2% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	53.1% identity		Open · Scan
M07767_2.00	NN 70-40%	CisBP	AAAAACCCCAGA	53.1% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	52.9% identity		Open · Scan
M06179_2.00	NN 70-40%	CisBP	TAAGCCTATAGA	52.8% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.7% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	52.7% identity		Open · Scan
M07685_2.00	NN 70-40%	CisBP	CTTTCCAGCCAC	52.5% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	52.5% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	52.4% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	52.4% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	52.3% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	52.2% identity		Open · Scan
MA1599.1	NN 70-40%	JASPAR	CGGGCCAAGCCCCTAT	52.2% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	52.0% identity		Open · Scan
M07565_2.00	NN 70-40%	CisBP	CCTCTGGGGGCTCGTCCA	51.9% identity		Open · Scan
M07654_2.00	NN 70-40%	CisBP	TGCCCCCTGGTGGC	51.8% identity		Open · Scan
M07662_2.00	NN 70-40%	CisBP	CCTGTGTCCTCCCTGGTCCCC	51.8% identity		Open · Scan
M08295_2.00	NN 70-40%	CisBP	CTGCTGGAATCTCCA	51.8% identity		Open · Scan
M08949_2.00	NN 70-40%	CisBP	TTCTATTTCTTCTTGTGTCA	51.8% identity		Open · Scan
M07634_2.00	NN 70-40%	CisBP	AAACGTCCACG	51.7% identity		Open · Scan
M07699_2.00	NN 70-40%	CisBP	GGTTTAT	51.7% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	51.6% identity		Open · Scan
M00769_2.00	NN 70-40%	CisBP	ACTCCCCC	51.5% identity		Open · Scan
M00774_2.00	NN 70-40%	CisBP	TTAGTATACACAAGT	51.5% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	51.5% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	51.5% identity		Open · Scan
M07775_2.00	NN 70-40%	CisBP	GCCGAAACCCGGG	51.4% identity		Open · Scan
M07679_2.00	NN 70-40%	CisBP	TGCGATCTC	51.2% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	51.2% identity		Open · Scan
MA1155.1	NN 70-40%	JASPAR	TGCACACACTGAAAA	51.2% identity		Open · Scan
M07645_2.00	NN 70-40%	CisBP	CTCCTT	51.1% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	51.1% identity		Open · Scan
M02913_2.00	NN 70-40%	CisBP	TTCGTGGCATTTTTCTA	51.0% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	51.0% identity		Open · Scan
M07618_2.00	NN 70-40%	CisBP	CCTTTGGTGCTC	51.0% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	50.9% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	50.9% identity		Open · Scan
M07656_2.00	NN 70-40%	CisBP	TGTCTAGTAAGTCTA	50.8% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	50.8% identity		Open · Scan
M07628_2.00	NN 70-40%	CisBP	AGTGGTTCTGCTTCT	50.7% identity		Open · Scan
M07714_2.00	NN 70-40%	CisBP	AGCCCATTGGGGCCTATGCCC	50.7% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	50.7% identity		Open · Scan
M07720_2.00	NN 70-40%	CisBP	TGTGTGTGTGGGCATGTGTGTGTGCGAGT	50.5% identity		Open · Scan
M08381_2.00	NN 70-40%	CisBP	ACATTTTGTCCTCCTAGTCCT	50.5% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	50.3% identity		Open · Scan
MA0130.1	NN 70-40%	JASPAR	ATCCAC	50.3% identity		Open · Scan
M07586_2.00	NN 70-40%	CisBP	GGGACCCGGGTGGGGGCGTCCCCC	50.1% identity		Open · Scan
M07702_2.00	NN 70-40%	CisBP	CTTCTTCCTTGG	50.1% identity		Open · Scan
M07703_2.00	NN 70-40%	CisBP	CCGACGG	50.1% identity		Open · Scan
M07723_2.00	NN 70-40%	CisBP	CCGCTGCTCCCTGCT	50.1% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	50.1% identity		Open · Scan
M08921_2.00	NN 70-40%	CisBP	CCTCATTCTTCTTGGACATG	50.1% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	50.0% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	50.0% identity		Open · Scan

ModCRE9

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q9UJW7_ZN229_HUMAN:237:329_5egb_A_1	ModCRE	Homology model	TCCCGGGCTAACCCAA	Region 237-329 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:237:329_5ei9_E_1	ModCRE	Homology model	GCCAGAGGCCTGTGC	Region 237-329 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:257:329_5eh2_F_1	ModCRE	Homology model	GCCAGAGCTCTGTGCA	Region 257-329 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:257:331_5v3j_E_1	ModCRE	Homology model	CCCCCGGGGCCG	Region 257-331 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:257:331_5v3m_C_1	ModCRE	Homology model	CAGGGGGGCCCCC	Region 257-331 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:486:763_5wjq_D_1	ModCRE	Homology model	CTGACGGCCCCGGTCCCCCCCCTTTCCC	Region 486-763 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3j_E_1	ModCRE	Homology model	TCCCCCCAGTTCCTCGTAGCGGGGTA	Region 517-791 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3m_C_1	ModCRE	Homology model	GGGCCCCCCCCCGCCCCCCCCCCCCC	Region 517-791 · 1 3D model		Open · Scan
TFS_sp_Q9UJW7_ZN229_HUMAN:637:790_2i13_A_1	ModCRE	Homology model	GTTAAGGAGGAGTCTCTTAGT	Region 637-790 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 825 aa

237-331

377-791

Region 237-331 5 PWM

Residues

95 aa

Domains

No overlapping PFAM annotation recorded

3D models

5 active PDBs

Templates

5EGB, 5EH2, 5EI9, 5V3J, 5V3M

Sources

Predicted = Low

Scan this region Show models

Region 377-791 4 PWM

Residues

415 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

6 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

11 active PDB models 6 summary rows

Region 237-3315 models

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:237:329_5egb_A_1	5egb	237-329	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:237:329_5ei9_E_1	5ei9	237-329	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:257:329_5eh2_F_1	5eh2	257-329	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:257:331_5v3j_E_1	5v3j	257-331	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:257:331_5v3m_C_1	5v3m	257-331	View model · PDB

Region 377-7916 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q9UJW7_ZN229_HUMAN:459:510_1llm_D_1	1llm	459-510	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:377:674_7w1m_H_1	7w1m	377-674	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:486:763_5wjq_D_1	5wjq	486-763	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3j_E_1	5v3j	517-791	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3m_C_1	5v3m	517-791	View model · PDB
Predicted = Low	TFS_sp_Q9UJW7_ZN229_HUMAN:637:790_2i13_A_1	2i13	637-790	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	345:822	637	790	P:A · DNA:C,D	59.7% / 68.2%	100	View · PDB TFS_sp_Q9UJW7_ZN229_HUMAN:637:790_2i13_A_1
1	5wjq	345:822	486	763	P:D · DNA:A,B	53.8% / 67.7%	98	View · PDB TFS_sp_Q9UJW7_ZN229_HUMAN:486:763_5wjq_D_1
2	5v3m	345:822	517	791	P:C · DNA:A,B	53.6% / 69.6%	99	View · PDB TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3m_C_1
3	5v3j	345:822	517	791	P:E · DNA:A,B	53.6% / 69.6%	99	View · PDB TFS_sp_Q9UJW7_ZN229_HUMAN:517:791_5v3j_E_1
1	1llm	345:822	459,459	510,510	P:C,D · DNA:A,B	42.3% / 67.3%	59,61	View · PDB DIMER_sp_Q9UJW7_ZN229_HUMAN:459:510_1llm_D_1
5	7w1m	345:822	377	674	P:H · DNA:F,G	33.4% / 47.7%	92	View · PDB TFS_sp_Q9UJW7_ZN229_HUMAN:377:674_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
33-74	PF01352	KRAB box	No overlap with loaded model regions
349-371	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
377-399	PF00096	Zinc finger, C2H2 type	overlaps 377-791
405-427	PF00096	Zinc finger, C2H2 type	overlaps 377-791
433-455	PF00096	Zinc finger, C2H2 type	overlaps 377-791
461-483	PF00096	Zinc finger, C2H2 type	overlaps 377-791
489-511	PF00096	Zinc finger, C2H2 type	overlaps 377-791
517-539	PF00096	Zinc finger, C2H2 type	overlaps 377-791
548-566	PF00096	Zinc finger, C2H2 type	overlaps 377-791
572-594	PF00096	Zinc finger, C2H2 type	overlaps 377-791
600-622	PF00096	Zinc finger, C2H2 type	overlaps 377-791
628-650	PF00096	Zinc finger, C2H2 type	overlaps 377-791
684-706	PF00096	Zinc finger, C2H2 type	overlaps 377-791
712-734	PF00096	Zinc finger, C2H2 type	overlaps 377-791
740-762	PF00096	Zinc finger, C2H2 type	overlaps 377-791
768-790	PF00096	Zinc finger, C2H2 type	overlaps 377-791
796-818	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions