ModCRE DB

Transcription factor

Q9UK33 - ZNF580

Zinc finger protein 580 (LDL-induced EC protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 172 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
M04642_2.00 Known CisBP CATTATGTTAAATTATTACCCTA Direct PWM Open · Scan
M04637_2.00 Known CisBP CCTACCCTCACCTACCCT Direct PWM Open · Scan
M04638_2.00 Known CisBP CCTACCCTCGCCTACCCT Direct PWM Open · Scan
M04639_2.00 Known CisBP CCTACCCTCCACCTACCCT Direct PWM Open · Scan
M04640_2.00 Known CisBP TGTTATGTTAAATAATTACCCTA Direct PWM Open · Scan
M04641_2.00 Known CisBP CCTACCCTCCCCCTACCCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 172 aa
87-172

Region 87-172 0 PWM

Residues
86 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 87-1721 model
Actions
Predicted = Low TFS_Q9UK33:87:172_5wjq_D_1 5wjq 87-172 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
120-142PF00096Zinc finger, C2H2 typeoverlaps 87-172
150-172PF00096Zinc finger, C2H2 typeoverlaps 87-172