Region 505-577 2 PWM
- Residues
- 73 aa
- Domains
- PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
- 3D models
- 2 active PDBs
- Templates
- 2JX1, 2MF8
- Sources
- Predicted = Low
Transcription factor
Q9UL68 - MYT1L
Myelin transcription factor 1-like protein (MyT1-L) (MyT1L)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1186 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q9UL68_MYT1L_HUMAN:505:531_2jx1_A_1 | ModCRE | Homology model | TTAAAAAG | Region 505-531 · 1 3D model | Open · Scan | |
| TFS_sp_Q9UL68_MYT1L_HUMAN:506:577_2mf8_A_1 | ModCRE | Homology model | TCTAAAAGTTTTG | Region 506-577 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1186 aa
505-577
902-981
Region 902-981 0 PWM
- Residues
- 80 aa
- Domains
- PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
- 3D models
- 3 active PDBs · 3 summary rows
- Templates
- 2JX1, 2MF8, 6WMI
- Sources
- Predicted = Low
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
3 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 505-5772 models
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q9UL68_MYT1L_HUMAN:505:531_2jx1_A_1 | 2jx1 | 505-531 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UL68_MYT1L_HUMAN:506:577_2mf8_A_1 | 2mf8 | 506-577 | View model · PDB |
Region 902-9813 models · 3 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q9UL68_MYT1L_HUMAN:902:932_2jx1_A_1 | 2jx1 | 902-932 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UL68_MYT1L_HUMAN:903:981_2mf8_A_1 | 2mf8 | 903-981 | View model · PDB |
| Predicted = Low | TFS_sp_Q9UL68_MYT1L_HUMAN:928:973_6wmi_A_1 | 6wmi | 928-973 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 2jx1 | 902:981 | 902 | 932 | P:A · DNA:B,C | 96.8% / 100.0% | 100 | View · PDB TFS_sp_Q9UL68_MYT1L_HUMAN:902:932_2jx1_A_1 |
| 1 | 2mf8 | 902:981 | 903 | 981 | P:A · DNA:B,C | 68.4% / 74.7% | 98 | View · PDB TFS_sp_Q9UL68_MYT1L_HUMAN:903:981_2mf8_A_1 |
| 3 | 6wmi | 902:981 | 928 | 973 | P:A · DNA:E,F | 23.9% / 37.0% | 31 | View · PDB TFS_sp_Q9UL68_MYT1L_HUMAN:928:973_6wmi_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 31-58 | PF01530 | Zinc finger, C2HC type | No overlap with loaded model regions |
| 505-531 | PF01530 | Zinc finger, C2HC type | overlaps 505-577 |
| 549-577 | PF01530 | Zinc finger, C2HC type | overlaps 505-577 |
| 621-872 | PF08474 | Myelin transcription factor 1 | No overlap with loaded model regions |
| 904-932 | PF01530 | Zinc finger, C2HC type | overlaps 902-981 |
| 953-981 | PF01530 | Zinc finger, C2HC type | overlaps 902-981 |
| 1007-1034 | PF01530 | Zinc finger, C2HC type | No overlap with loaded model regions |