ModCRE DB

Transcription factor

Q9UMR3 - TBX20

T-box transcription factor TBX20 (T-box protein 20)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 447 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0689.1 Known JASPAR TAGGTGTGAAG Direct PWM Open · Scan
M03565_2.00 Known CisBP AGGTGTGAAGGTGTGA Direct PWM Open · Scan
M03566_2.00 Known CisBP AGGTGTGAAATTCACACCT Direct PWM Open · Scan
M03567_2.00 Known CisBP GAAAAGGTGTGAAAG Direct PWM Open · Scan
M03568_2.00 Known CisBP TAGGTGTGAAG Direct PWM Open · Scan
M03569_2.00 Known CisBP AGGTGTGAAGGTGTGA Direct PWM Open · Scan
M05813_2.00 Known CisBP GAGGTGTGAAGGTGTGAA Direct PWM Open · Scan
M05814_2.00 Known CisBP GAGGTGTGAATTTCACACCTC Direct PWM Open · Scan
M05815_2.00 Known CisBP AAGGTGTGAACGCGTGAA Direct PWM Open · Scan
M05816_2.00 Known CisBP AAGGTGTGAATTTCACACCTT Direct PWM Open · Scan
M05817_2.00 Known CisBP AAGGTGTGAGGGTGTGAA Direct PWM Open · Scan
M05818_2.00 Known CisBP TTCACACCTAGGTGTGAA Direct PWM Open · Scan
M05819_2.00 Known CisBP AAGGTGTGAGGGTGTGAT Direct PWM Open · Scan
M05820_2.00 Known CisBP TTCACACCTAAGTGTGAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 447 aa
104-287

Region 104-287 0 PWM

Residues
184 aa
Domains
PF00907 · T-box
3D models
1 active PDB
Templates
4S0H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 104-2871 model
Actions
Predicted = Low DIMER_Q9UMR3:104:287_4s0h_A_1 4s0h 104-287 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
102-288PF00907T-boxoverlaps 104-287