ModCRE DB

Transcription factor

Q9UQD2 - ZFP28

UniProtKB entry deleted

69 Generated PWM

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08949_2.00 NN 70+% CisBP TTCTATTTCTTCTTGTGTCA 85.4% identity Open · Scan
Nearest Neighbor (70% - 40%)68
MotifPredictionSourceDNA bindingSupportLogoActions
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 63.5% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 62.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 62.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 62.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.4% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 60.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.4% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 59.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 59.1% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 58.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 57.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 57.2% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 57.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 57.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 56.8% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 56.7% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 56.5% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 56.1% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 56.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 55.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.7% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 55.7% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.1% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 54.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 54.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 53.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 53.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.2% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 53.1% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.0% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 53.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.5% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.5% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 51.5% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 51.4% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 51.4% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 50.9% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 50.9% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 50.8% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.5% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 50.4% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 50.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 50.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 50.2% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Domains

Imported domain tags13
BolAC1_4CxxC_CxxC_SSSSHTH_Tnp_ISL3KRABZn_Tnp_IS1595zf-C2H2zf-C2H2_4zf-C2H2_6zf-C2H2_jazzf-H2C2_2zf-metzf-met2