Region 204-344 5 PWM
- Residues
- 141 aa
- Domains
- PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 1H88, 1MSF, 3OSF, 3OSG, 5EYB
- Sources
- Predicted = Low
Transcription factor
Q9Y222 - DMTF1
Cyclin-D-binding Myb-like transcription factor 1 (hDMTF1) (Cyclin-D-interacting Myb-like protein 1) (hDMP1)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 760 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_sp_Q9Y222_DMTF1_HUMAN:204:325_5eyb_A_1 | ModCRE | Homology model | GGGGCGCAAAGGGGTAA | Region 204-325 · 1 3D model | Open · Scan | |
| TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osf_A_1 | ModCRE | Homology model | TAAAACTTGTCAA | Region 226-290 · 1 3D model | Open · Scan | |
| TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osg_A_1 | ModCRE | Homology model | AAAACGTTTCAT | Region 226-290 · 1 3D model | Open · Scan | |
| TFS_sp_Q9Y222_DMTF1_HUMAN:226:344_1h88_C_1 | ModCRE | Homology model | CATTCCCCTTAGGAG | Region 226-344 · 1 3D model | Open · Scan | |
| TFS_sp_Q9Y222_DMTF1_HUMAN:306:344_1msf_C_1 | ModCRE | Homology model | TAAAACTGCTT | Region 306-344 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
760 aa
204-344
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 204-3445 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_sp_Q9Y222_DMTF1_HUMAN:204:325_5eyb_A_1 | 5eyb | 204-325 | View model · PDB |
| Predicted = Low | TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osf_A_1 | 3osf | 226-290 | View model · PDB |
| Predicted = Low | TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osg_A_1 | 3osg | 226-290 | View model · PDB |
| Predicted = Low | TFS_sp_Q9Y222_DMTF1_HUMAN:226:344_1h88_C_1 | 1h88 | 226-344 | View model · PDB |
| Predicted = Low | TFS_sp_Q9Y222_DMTF1_HUMAN:306:344_1msf_C_1 | 1msf | 306-344 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 5 | 1msf | 181:354 | 306 | 344 | P:C · DNA:A,B | 38.5% / 64.1% | 36 | View · PDB TFS_sp_Q9Y222_DMTF1_HUMAN:306:344_1msf_C_1 |
| 2 | 3osf | 181:354 | 226 | 290 | P:A · DNA:B,C | 35.8% / 53.7% | 63 | View · PDB TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osf_A_1 |
| 3 | 3osg | 181:354 | 226 | 290 | P:A · DNA:B,C | 35.8% / 53.7% | 59 | View · PDB TFS_sp_Q9Y222_DMTF1_HUMAN:226:290_3osg_A_1 |
| 4 | 1h88 | 181:354 | 226 | 344 | P:C · DNA:D,E | 30.3% / 53.3% | 71 | View · PDB TFS_sp_Q9Y222_DMTF1_HUMAN:226:344_1h88_C_1 |
| 1 | 5eyb | 181:354 | 204 | 325 | P:A · DNA:C,D | 29.6% / 48.8% | 32 | View · PDB TFS_sp_Q9Y222_DMTF1_HUMAN:204:325_5eyb_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 78-156 | PF20588 | Cyclin-D-binding Myb-like transcription factor 1 N-terminal | No overlap with loaded model regions |
| 225-265 | PF00249 | Myb-like DNA-binding domain | overlaps 204-344 |
| 274-329 | PF00249 | Myb-like DNA-binding domain | overlaps 204-344 |