Transcription factor

Q9Y2H8 - ZNF510

Zinc finger protein 510

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 683 aa

97 Generated PWM 9 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)94

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	68.6% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	68.6% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	66.2% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	65.6% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	65.0% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	65.0% identity		Open · Scan
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	65.0% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	64.7% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	63.8% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	63.8% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	63.5% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	63.5% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	62.1% identity		Open · Scan
M07613_2.00	NN 70-40%	CisBP	TCACTCAGTCATTCA	60.8% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	60.3% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	59.5% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	59.4% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	59.4% identity		Open · Scan
M07754_2.00	NN 70-40%	CisBP	CGCCCCCTCCCT	58.8% identity		Open · Scan
M07701_2.00	NN 70-40%	CisBP	CCTGGGCTAGGCCCTGGC	58.3% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	58.1% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	58.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	57.4% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	57.4% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	57.2% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	56.9% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	56.8% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	56.8% identity		Open · Scan
M07633_2.00	NN 70-40%	CisBP	CTCTCGTTGTGCCTTTGCCAT	56.6% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	56.5% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	56.5% identity		Open · Scan
M07715_2.00	NN 70-40%	CisBP	CCGCCGCCGCCGTGG	56.5% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	56.0% identity		Open · Scan
M08392_2.00	NN 70-40%	CisBP	CTTCACCTGCTGAGG	56.0% identity		Open · Scan
M08540_2.00	NN 70-40%	CisBP	CCCCT	55.8% identity		Open · Scan
M07777_2.00	NN 70-40%	CisBP	GCCAATTTCCGTGGTGTAAAT	55.7% identity		Open · Scan
M07601_2.00	NN 70-40%	CisBP	CAGATGCCGGCACCATGCTTC	55.6% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	55.5% identity		Open · Scan
M08314_2.00	NN 70-40%	CisBP	ATTCATCAAGGTCCTCAACAATGG	55.5% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	55.4% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	55.3% identity		Open · Scan
M07618_2.00	NN 70-40%	CisBP	CCTTTGGTGCTC	55.3% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	55.3% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	54.9% identity		Open · Scan
M07656_2.00	NN 70-40%	CisBP	TGTCTAGTAAGTCTA	54.7% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	54.5% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	54.3% identity		Open · Scan
M07678_2.00	NN 70-40%	CisBP	CCCGCCCCCTCCTCCCCCTTCCCACCC	53.9% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	53.7% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	53.7% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	53.7% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	53.6% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	53.5% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	53.3% identity		Open · Scan
M08234_2.00	NN 70-40%	CisBP	GTCAACTTGACTGGGCCA	53.3% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	53.3% identity		Open · Scan
M07607_2.00	NN 70-40%	CisBP	GGCTCCACG	53.2% identity		Open · Scan
M07762_2.00	NN 70-40%	CisBP	GCCGCGCACAGGCTTCTAGCC	53.2% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	53.2% identity		Open · Scan
M07582_2.00	NN 70-40%	CisBP	TCCCTG	52.9% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	52.7% identity		Open · Scan
MA1599.1	NN 70-40%	JASPAR	CGGGCCAAGCCCCTAT	52.7% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	52.6% identity		Open · Scan
M07600_2.00	NN 70-40%	CisBP	GCATTAGC	52.5% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	52.5% identity		Open · Scan
MA1600.1	NN 70-40%	JASPAR	ATACAGTCCACCCCTTTA	52.3% identity		Open · Scan
M07565_2.00	NN 70-40%	CisBP	CCTCTGGGGGCTCGTCCA	52.2% identity		Open · Scan
M06179_2.00	NN 70-40%	CisBP	TAAGCCTATAGA	51.8% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	51.7% identity		Open · Scan
MA1155.1	NN 70-40%	JASPAR	TGCACACACTGAAAA	51.7% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	51.7% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	51.5% identity		Open · Scan
M07775_2.00	NN 70-40%	CisBP	GCCGAAACCCGGG	51.4% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	51.4% identity		Open · Scan
MA0747.1	NN 70-40%	JASPAR	GCCACGCCCACT	51.2% identity		Open · Scan
MA1592.1	NN 70-40%	JASPAR	GGTATGAGTTCTCGCT	51.2% identity		Open · Scan
M08859_2.00	NN 70-40%	CisBP	CATTTTTTCCTCCTAGGCCT	50.9% identity		Open · Scan
M00609_2.00	NN 70-40%	CisBP	GGAAGCCCTA	50.8% identity		Open · Scan
M01442_2.00	NN 70-40%	CisBP	ACCCCACATT	50.8% identity		Open · Scan
M08357_2.00	NN 70-40%	CisBP	GAGCCTGCTACTGAGCCTGGG	50.8% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.7% identity		Open · Scan
M03710_2.00	NN 70-40%	CisBP	CTCACGCCCCCC	50.6% identity		Open · Scan
MA0516.1	NN 70-40%	JASPAR	GCCCCGCCCCCTCCC	50.5% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	50.3% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	50.2% identity		Open · Scan
M07627_2.00	NN 70-40%	CisBP	CAGTCACCTTCTGG	50.1% identity		Open · Scan
M07691_2.00	NN 70-40%	CisBP	CCTGCAGCCACCTTGGCCTTG	50.1% identity		Open · Scan
M07767_2.00	NN 70-40%	CisBP	AAAAACCCCAGA	50.1% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	50.1% identity		Open · Scan
M00765_2.00	NN 70-40%	CisBP	CCCGCCCCC	50.0% identity		Open · Scan
M05859_2.00	NN 70-40%	CisBP	GGCCACGCCCACT	50.0% identity		Open · Scan
M08283_2.00	NN 70-40%	CisBP	GACTTTTATTTT	50.0% identity		Open · Scan
MA0685.1	NN 70-40%	JASPAR	TAAGCCACGCCCCCTTT	50.0% identity		Open · Scan
MA1564.1	NN 70-40%	JASPAR	GCCACGCCCCCC	50.0% identity		Open · Scan

ModCRE3

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q9Y2H8_ZN510_HUMAN:402:511_5egb_A_1	ModCRE	Homology model	CCGGGCGCGGGGGGGGGG	Region 402-511 · 1 3D model		Open · Scan
TFS_sp_Q9Y2H8_ZN510_HUMAN:402:511_5ei9_E_1	ModCRE	Homology model	CCCCCGGGGGGGGGCCC	Region 402-511 · 1 3D model		Open · Scan
TFS_sp_Q9Y2H8_ZN510_HUMAN:403:511_5eh2_F_1	ModCRE	Homology model	CCCCCGTGGGGGGGCCGGA	Region 403-511 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 683 aa

402-676

Region 402-676 3 PWM

Residues

275 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

9 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EGB, 5EH2, 5EI9, 5V3J, 5V3M, 5WJQ, ...

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

9 active PDB models 6 summary rows

Region 402-6769 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q9Y2H8_ZN510_HUMAN:542:593_1llm_C_1	1llm	542-593	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:402:511_5egb_A_1	5egb	402-511	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:402:511_5ei9_E_1	5ei9	402-511	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:402:646_8ssr_A_1	8ssr	402-646	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:402:676_5wjq_D_1	5wjq	402-676	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:403:511_5eh2_F_1	5eh2	403-511	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:403:676_5v3j_E_1	5v3j	403-676	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:403:676_5v3m_C_1	5v3m	403-676	View model · PDB
Predicted = Low	TFS_sp_Q9Y2H8_ZN510_HUMAN:441:594_2i13_A_1	2i13	441-594	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	401:676	441	594	P:A · DNA:C,D	62.3% / 74.7%	100	View · PDB TFS_sp_Q9Y2H8_ZN510_HUMAN:441:594_2i13_A_1
1	5v3m	401:676	403	676	P:C · DNA:A,B	51.6% / 65.8%	98	View · PDB TFS_sp_Q9Y2H8_ZN510_HUMAN:403:676_5v3m_C_1
2	5v3j	401:676	403	676	P:E · DNA:A,B	51.6% / 65.8%	98	View · PDB TFS_sp_Q9Y2H8_ZN510_HUMAN:403:676_5v3j_E_1
3	5wjq	401:676	402	676	P:D · DNA:A,B	50.7% / 65.6%	97	View · PDB TFS_sp_Q9Y2H8_ZN510_HUMAN:402:676_5wjq_D_1
1	1llm	401:676	542,542	593,593	P:C,D · DNA:A,B	50.0% / 67.3%	59,61	View · PDB DIMER_sp_Q9Y2H8_ZN510_HUMAN:542:593_1llm_C_1
5	8ssr	401:676	402	646	P:A · DNA:B,C	38.2% / 55.1%	94	View · PDB TFS_sp_Q9Y2H8_ZN510_HUMAN:402:646_8ssr_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
45-86	PF01352	KRAB box	No overlap with loaded model regions
404-426	PF00096	Zinc finger, C2H2 type	overlaps 402-676
432-454	PF00096	Zinc finger, C2H2 type	overlaps 402-676
460-482	PF00096	Zinc finger, C2H2 type	overlaps 402-676
488-510	PF00096	Zinc finger, C2H2 type	overlaps 402-676
516-538	PF00096	Zinc finger, C2H2 type	overlaps 402-676
544-566	PF00096	Zinc finger, C2H2 type	overlaps 402-676
572-594	PF00096	Zinc finger, C2H2 type	overlaps 402-676
600-622	PF00096	Zinc finger, C2H2 type	overlaps 402-676
628-650	PF00096	Zinc finger, C2H2 type	overlaps 402-676