Region 539-652 0 PWM
- Residues
- 114 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5T0U
- Sources
- Structure model
Transcription factor
Q9Y2L8 - ZKSCAN5
Zinc finger protein with KRAB and SCAN domains 5 (Zinc finger protein 95 homolog) (Zfp-95)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 839 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known3
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
839 aa
539-652
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 539-6521 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_Q9Y2L8:539:652_5t0u_A_1 | 5t0u | 539-652 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 47-134 | PF02023 | SCAN domain | No overlap with loaded model regions |
| 222-258 | PF01352 | KRAB box | No overlap with loaded model regions |
| 346-368 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 374-396 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 402-424 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 432-452 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 549-571 | PF00096 | Zinc finger, C2H2 type | overlaps 539-652 |
| 577-599 | PF00096 | Zinc finger, C2H2 type | overlaps 539-652 |
| 605-627 | PF00096 | Zinc finger, C2H2 type | overlaps 539-652 |
| 633-655 | PF00096 | Zinc finger, C2H2 type | overlaps 539-652 |
| 717-739 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |
| 773-795 | PF00096 | Zinc finger, C2H2 type | No overlap with loaded model regions |