Transcription factor

Q9Y2P0 - ZNF835

Zinc finger protein 835

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 537 aa

133 Generated PWM 7 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)132

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
M00960_2.00	NN 70-40%	CisBP	TGCATCCC	68.6% identity		Open · Scan
M08312_2.00	NN 70-40%	CisBP	ATTGGGTTTCTGTTGCTT	67.8% identity		Open · Scan
M00944_2.00	NN 70-40%	CisBP	TCGCTATAA	67.4% identity		Open · Scan
M00948_2.00	NN 70-40%	CisBP	GCAGCACC	66.2% identity		Open · Scan
M00952_2.00	NN 70-40%	CisBP	GGATGCTC	66.2% identity		Open · Scan
M00959_2.00	NN 70-40%	CisBP	GCCCTCCC	66.2% identity		Open · Scan
M00950_2.00	NN 70-40%	CisBP	GCAGCCCA	65.8% identity		Open · Scan
M07691_2.00	NN 70-40%	CisBP	CCTGCAGCCACCTTGGCCTTG	65.5% identity		Open · Scan
M08330_2.00	NN 70-40%	CisBP	TGGGTGCCGGACTGCTGTTCC	65.5% identity		Open · Scan
M00943_2.00	NN 70-40%	CisBP	CCCGCTGC	65.0% identity		Open · Scan
M00958_2.00	NN 70-40%	CisBP	CGGCATCCC	65.0% identity		Open · Scan
M07687_2.00	NN 70-40%	CisBP	ACAAATAAGGTTCTTGTGCCCCCTGCT	64.2% identity		Open · Scan
M00939_2.00	NN 70-40%	CisBP	CCACCTCA	63.8% identity		Open · Scan
M02924_2.00	NN 70-40%	CisBP	AGTGTTAACAGAACACCT	63.7% identity		Open · Scan
M00953_2.00	NN 70-40%	CisBP	ATCTATAT	62.3% identity		Open · Scan
M02913_2.00	NN 70-40%	CisBP	TTCGTGGCATTTTTCTA	62.0% identity		Open · Scan
M04610_2.00	NN 70-40%	CisBP	CGGCGACGCGAACAC	62.0% identity		Open · Scan
MA1587.1	NN 70-40%	JASPAR	CCTCGACCTCCTGA	61.9% identity		Open · Scan
M00955_2.00	NN 70-40%	CisBP	ACGTCCTCT	61.1% identity		Open · Scan
M00619_2.00	NN 70-40%	CisBP	TAAATCACGG	60.7% identity		Open · Scan
M04524_2.00	NN 70-40%	CisBP	TAAATCACTGCATTTCACTCA	60.7% identity		Open · Scan
MA0483.1	NN 70-40%	JASPAR	AAATCACAGCA	60.7% identity		Open · Scan
M08935_2.00	NN 70-40%	CisBP	CCTCCTCCCTCAGACC	60.5% identity		Open · Scan
M08267_2.00	NN 70-40%	CisBP	CAGTTTCATTTTCC	59.7% identity		Open · Scan
M04611_2.00	NN 70-40%	CisBP	CTTTCGGACAC	59.1% identity		Open · Scan
M04387_2.00	NN 70-40%	CisBP	CGTGCTCCCC	58.5% identity		Open · Scan
M04650_2.00	NN 70-40%	CisBP	GCATAACTGCCCCGCTGCC	58.4% identity		Open · Scan
M04598_2.00	NN 70-40%	CisBP	CGCTAACTCTCCACA	58.1% identity		Open · Scan
M07635_2.00	NN 70-40%	CisBP	AAGTTTTCTTGTATTATATCT	57.9% identity		Open · Scan
M08944_2.00	NN 70-40%	CisBP	TACCATGCTGTTTTGATTAC	57.9% identity		Open · Scan
M04653_2.00	NN 70-40%	CisBP	GGTACGGTTGTCCATGTTGCAA	57.8% identity		Open · Scan
M08375_2.00	NN 70-40%	CisBP	TTCCCCATTGGCTACTGCACCGGTCCT	57.5% identity		Open · Scan
M08325_2.00	NN 70-40%	CisBP	TTTTTTTTT	57.4% identity		Open · Scan
M00782_2.00	NN 70-40%	CisBP	AGTGTGCGCTA	57.3% identity		Open · Scan
M08355_2.00	NN 70-40%	CisBP	GCGAACTCCTATTCATCC	57.3% identity		Open · Scan
M07590_2.00	NN 70-40%	CisBP	TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT	56.8% identity		Open · Scan
M07605_2.00	NN 70-40%	CisBP	TATTTTTTTTTATTTTTTTTTTTTTTTTTT	56.8% identity		Open · Scan
M07579_2.00	NN 70-40%	CisBP	CATCTCCAGGA	56.5% identity		Open · Scan
M07658_2.00	NN 70-40%	CisBP	CCGCCGCAGCCGCCG	56.5% identity		Open · Scan
M07686_2.00	NN 70-40%	CisBP	TAGCTTGTTTCCAGCCAC	56.2% identity		Open · Scan
M07689_2.00	NN 70-40%	CisBP	ACCCAGGCTCCTTCCATCTTGTGGCTC	56.2% identity		Open · Scan
M07700_2.00	NN 70-40%	CisBP	ATGTTGTGAGGAAGCCCA	56.2% identity		Open · Scan
M07566_2.00	NN 70-40%	CisBP	TCAAACCATCCTTGC	56.1% identity		Open · Scan
M08887_2.00	NN 70-40%	CisBP	CCTCCTCCAGGAAGCCTTCCCTGA	56.1% identity		Open · Scan
M08309_2.00	NN 70-40%	CisBP	AAAAACCCCCCTGCAGAGCCCAGCCCT	56.0% identity		Open · Scan
M08903_2.00	NN 70-40%	CisBP	ATTCCATTCTATTCCATTCT	55.9% identity		Open · Scan
M00945_2.00	NN 70-40%	CisBP	CACCGCAC	55.8% identity		Open · Scan
M08985_2.00	NN 70-40%	CisBP	TGAGGACCTACTGTGTGCC	55.6% identity		Open · Scan
M08934_2.00	NN 70-40%	CisBP	GCTGTACCTGCTTATTAGGC	55.4% identity		Open · Scan
M08256_2.00	NN 70-40%	CisBP	GTGCCTT	55.3% identity		Open · Scan
M07610_2.00	NN 70-40%	CisBP	CCTTCTTCCTCCCCCCTGCCCACC	55.2% identity		Open · Scan
M01474_2.00	NN 70-40%	CisBP	CGCCGATCAC	55.1% identity		Open · Scan
M07762_2.00	NN 70-40%	CisBP	GCCGCGCACAGGCTTCTAGCC	55.1% identity		Open · Scan
M08347_2.00	NN 70-40%	CisBP	GCCCTGGGCAGC	55.1% identity		Open · Scan
M07587_2.00	NN 70-40%	CisBP	CCCCCTCCCCAGTCGAGCCCCCGC	55.0% identity		Open · Scan
M07588_2.00	NN 70-40%	CisBP	TCCTTCCCTCTTTCC	55.0% identity		Open · Scan
M07753_2.00	NN 70-40%	CisBP	TGCATTCCTTGGCTTGTG	54.9% identity		Open · Scan
MA1124.1	NN 70-40%	JASPAR	CATTCATTCATTC	54.9% identity		Open · Scan
M07646_2.00	NN 70-40%	CisBP	CTTTTTTTT	54.7% identity		Open · Scan
M07581_2.00	NN 70-40%	CisBP	TCCCCTGTGCTTCTCTCCCCT	54.6% identity		Open · Scan
M08252_2.00	NN 70-40%	CisBP	CCGGCTCCAGCACCC	54.6% identity		Open · Scan
M08254_2.00	NN 70-40%	CisBP	CTGCCCTGGGACTTT	54.3% identity		Open · Scan
M04480_2.00	NN 70-40%	CisBP	ATTGATTACCCACCCTAC	54.2% identity		Open · Scan
M08373_2.00	NN 70-40%	CisBP	CCCCCTGGCTCTTCCTCT	54.2% identity		Open · Scan
M07712_2.00	NN 70-40%	CisBP	ACATTTTTTTAATCTAAAAAAACATTTACA	54.0% identity		Open · Scan
M08274_2.00	NN 70-40%	CisBP	TTACTTGCAGCCCAACGCATTCCTAAC	54.0% identity		Open · Scan
M08335_2.00	NN 70-40%	CisBP	AGTCGTTGTCTG	53.9% identity		Open · Scan
M04590_2.00	NN 70-40%	CisBP	TGCGCTAACCATTGC	53.8% identity		Open · Scan
MA1588.1	NN 70-40%	JASPAR	GAATTCTTGGTTGAC	53.6% identity		Open · Scan
M03686_2.00	NN 70-40%	CisBP	TGATTGCTCTTTT	53.5% identity		Open · Scan
M08889_2.00	NN 70-40%	CisBP	GCTGCTCTTTTT	53.5% identity		Open · Scan
M08311_2.00	NN 70-40%	CisBP	CTGGAACAGAAGGGGCGA	53.4% identity		Open · Scan
M08395_2.00	NN 70-40%	CisBP	GCTGCCTACTCTTCC	53.4% identity		Open · Scan
M07660_2.00	NN 70-40%	CisBP	CCGCGCCTACCTGAGGGCGCGGGCCTGGGG	53.2% identity		Open · Scan
M08334_2.00	NN 70-40%	CisBP	TTTGTTTTTTTCTGATTGCTTTTTACTTAT	53.2% identity		Open · Scan
M07683_2.00	NN 70-40%	CisBP	GTGGGAAAGCCT	53.1% identity		Open · Scan
MA1601.1	NN 70-40%	JASPAR	ATGTGGGAAA	53.1% identity		Open · Scan
M04613_2.00	NN 70-40%	CisBP	CTCATGTGCTAATTACAAA	52.8% identity		Open · Scan
M04505_2.00	NN 70-40%	CisBP	AGCTTTTCCCACAC	52.7% identity		Open · Scan
M07620_2.00	NN 70-40%	CisBP	TTGGATCTGTGGATTCATGTCTTTCAT	52.7% identity		Open · Scan
M07667_2.00	NN 70-40%	CisBP	CCGCACAGGCCCCCGGGCCCC	52.7% identity		Open · Scan
M08917_2.00	NN 70-40%	CisBP	GCTGAGCCATGTGGGGTGCT	52.7% identity		Open · Scan
M05853_2.00	NN 70-40%	CisBP	CCACCTTTAGCCATATCT	52.5% identity		Open · Scan
M08901_2.00	NN 70-40%	CisBP	CCAGTTCACACC	52.5% identity		Open · Scan
M08292_2.00	NN 70-40%	CisBP	TGTATTCCTTGTCATGTGTGG	52.4% identity		Open · Scan
M07649_2.00	NN 70-40%	CisBP	CCCCCCCCCCCCTCAGGAATGCC	52.3% identity		Open · Scan
M04465_2.00	NN 70-40%	CisBP	GTGATTCTTATCTTATCCTT	52.1% identity		Open · Scan
M00142_2.00	NN 70-40%	CisBP	GTGCTCCT	52.0% identity		Open · Scan
M01883_2.00	NN 70-40%	CisBP	TGCCCCTGA	52.0% identity		Open · Scan
M07578_2.00	NN 70-40%	CisBP	CAACTCTCC	52.0% identity		Open · Scan
M06180_2.00	NN 70-40%	CisBP	GTGCTTTGAGTGTTTTTTTTGGTCG	51.8% identity		Open · Scan
M07598_2.00	NN 70-40%	CisBP	CTGACAATACCAAGTGTTGAC	51.8% identity		Open · Scan
M08329_2.00	NN 70-40%	CisBP	GCTGCATAGTATTCC	51.8% identity		Open · Scan
M07733_2.00	NN 70-40%	CisBP	TCTTTCTCTCTCTCC	51.7% identity		Open · Scan
M08390_2.00	NN 70-40%	CisBP	GCTTTGTTGACTCAC	51.7% identity		Open · Scan
MA1656.1	NN 70-40%	JASPAR	CCAAGCCCAACCAG	51.7% identity		Open · Scan
M00769_2.00	NN 70-40%	CisBP	ACTCCCCC	51.5% identity		Open · Scan
M07761_2.00	NN 70-40%	CisBP	CTGATTATTCACCCA	51.5% identity		Open · Scan
M07684_2.00	NN 70-40%	CisBP	CCTGTTCTTGACTTT	51.4% identity		Open · Scan
MA1602.1	NN 70-40%	JASPAR	CGTCTACACGGG	51.4% identity		Open · Scan
M07764_2.00	NN 70-40%	CisBP	CTGCACTCTCCCCTTCCCCCCCTCCCC	51.3% identity		Open · Scan
M04536_2.00	NN 70-40%	CisBP	ACGTAACCCGATACC	51.2% identity		Open · Scan
M07770_2.00	NN 70-40%	CisBP	CTTGGACTT	51.2% identity		Open · Scan
M08399_2.00	NN 70-40%	CisBP	TACTCTGGGGCCACATGACTC	51.2% identity		Open · Scan
M07729_2.00	NN 70-40%	CisBP	CCAGACTGCCTGCCAAAACCCCCT	51.1% identity		Open · Scan
M08291_2.00	NN 70-40%	CisBP	AATCCAGCCCTAGACTCTCCC	51.1% identity		Open · Scan
M08371_2.00	NN 70-40%	CisBP	CCAGACTTGTCCTCT	51.0% identity		Open · Scan
M07707_2.00	NN 70-40%	CisBP	TCCCGC	50.9% identity		Open · Scan
M07746_2.00	NN 70-40%	CisBP	CAGCTGGCGCCCAACATGGGTCCC	50.9% identity		Open · Scan
M08367_2.00	NN 70-40%	CisBP	GGGGTGATGACCACTCTGGCTTCTTAC	50.9% identity		Open · Scan
MA0056.1	NN 70-40%	JASPAR	TGGGGA	50.9% identity		Open · Scan
M04621_2.00	NN 70-40%	CisBP	AGCAATTCCGCTCA	50.7% identity		Open · Scan
M07601_2.00	NN 70-40%	CisBP	CAGATGCCGGCACCATGCTTC	50.7% identity		Open · Scan
MA1589.1	NN 70-40%	JASPAR	TAGGAGTGGAATTGCTGGGTC	50.7% identity		Open · Scan
M08255_2.00	NN 70-40%	CisBP	CTCTTCCGGT	50.6% identity		Open · Scan
M08283_2.00	NN 70-40%	CisBP	GACTTTTATTTT	50.5% identity		Open · Scan
MA0740.1	NN 70-40%	JASPAR	GGCCACGCCCCCTT	50.5% identity		Open · Scan
MA0528.1	NN 70-40%	JASPAR	GGAGGAGGAGGGGGAGGAGGA	50.3% identity		Open · Scan
M00786_2.00	NN 70-40%	CisBP	TATATATAT	50.2% identity		Open · Scan
M08300_2.00	NN 70-40%	CisBP	CTGCCCAATTCAT	50.2% identity		Open · Scan
M00224_2.00	NN 70-40%	CisBP	CCCGCCCC	50.0% identity		Open · Scan
M01447_2.00	NN 70-40%	CisBP	TACCCCTGA	50.0% identity		Open · Scan
M01457_2.00	NN 70-40%	CisBP	GCGCACGGAC	50.0% identity		Open · Scan
M03671_2.00	NN 70-40%	CisBP	ATTACCATACAAGTGCAC	50.0% identity		Open · Scan
M04430_2.00	NN 70-40%	CisBP	GACCACGCCCA	50.0% identity		Open · Scan
M06179_2.00	NN 70-40%	CisBP	TAAGCCTATAGA	50.0% identity		Open · Scan
M07727_2.00	NN 70-40%	CisBP	CGCCGCCTCCCC	50.0% identity		Open · Scan
M08860_2.00	NN 70-40%	CisBP	TCTTATAAGGGCACTAATCCCATT	50.0% identity		Open · Scan
M08914_2.00	NN 70-40%	CisBP	ATTTAGTCCATTTACATTTAATGT	50.0% identity		Open · Scan
MA0742.1	NN 70-40%	JASPAR	GACCACGCCCTTATT	50.0% identity		Open · Scan
MA1154.1	NN 70-40%	JASPAR	CTTTCCCACAACACGAC	50.0% identity		Open · Scan
MA1596.1	NN 70-40%	JASPAR	GCCTCAGCCTCCCGAG	50.0% identity		Open · Scan

ModCRE1

Motif	Prediction	Source	DNA binding	Support	Logo	Actions
TFS_sp_Q9Y2P0_ZN835_HUMAN:359:469_5ei9_E_1	ModCRE	Homology model	TCCCGGGGGGCCGGGGG	Region 359-469 · 1 3D model		Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 537 aa

136-492

Region 136-492 1 PWM

Residues

357 aa

Domains

PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type

3D models

7 active PDBs · 6 summary rows

Templates

1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 7W1M

Sources

Predicted = Low

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

7 active PDB models 6 summary rows

Region 136-4927 models · 6 summary rows

Source ↕	Model ↕	Template ↕	Residues modeled ↕	Actions
Predicted = Low	DIMER_sp_Q9Y2P0_ZN835_HUMAN:136:184_1llm_D_1	1llm	136-184	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:163:441_5wjq_D_1	5wjq	163-441	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:193:469_5v3j_E_1	5v3j	193-469	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:193:469_5v3m_C_1	5v3m	193-469	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:195:492_7w1m_H_1	7w1m	195-492	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:315:468_2i13_A_1	2i13	315-468	View model · PDB
Predicted = Low	TFS_sp_Q9Y2P0_ZN835_HUMAN:359:469_5ei9_E_1	5ei9	359-469	View model · PDB

Model-summary evidence imported for this region.

Rank	Template	Domain	N-tails	C-tails	Chains	Identity / similarity	Coverage	Model file
4	2i13	135:507	315	468	P:A · DNA:C,D	57.1% / 72.1%	100	View · PDB TFS_sp_Q9Y2P0_ZN835_HUMAN:315:468_2i13_A_1
1	1llm	135:507	136,136	184,184	P:C,D · DNA:A,B	53.1% / 65.3%	56,57	View · PDB DIMER_sp_Q9Y2P0_ZN835_HUMAN:136:184_1llm_D_1
1	5wjq	135:507	163	441	P:D · DNA:A,B	50.5% / 65.6%	99	View · PDB TFS_sp_Q9Y2P0_ZN835_HUMAN:163:441_5wjq_D_1
2	5v3m	135:507	193	469	P:C · DNA:A,B	48.7% / 66.8%	100	View · PDB TFS_sp_Q9Y2P0_ZN835_HUMAN:193:469_5v3m_C_1
3	5v3j	135:507	193	469	P:E · DNA:A,B	48.7% / 66.8%	100	View · PDB TFS_sp_Q9Y2P0_ZN835_HUMAN:193:469_5v3j_E_1
5	7w1m	135:507	195	492	P:H · DNA:F,G	36.5% / 51.5%	92	View · PDB TFS_sp_Q9Y2P0_ZN835_HUMAN:195:492_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
111-132	PF00096	Zinc finger, C2H2 type	No overlap with loaded model regions
138-160	PF00096	Zinc finger, C2H2 type	overlaps 136-492
166-188	PF00096	Zinc finger, C2H2 type	overlaps 136-492
194-216	PF00096	Zinc finger, C2H2 type	overlaps 136-492
222-244	PF00096	Zinc finger, C2H2 type	overlaps 136-492
250-272	PF00096	Zinc finger, C2H2 type	overlaps 136-492
278-300	PF00096	Zinc finger, C2H2 type	overlaps 136-492
306-328	PF00096	Zinc finger, C2H2 type	overlaps 136-492
334-356	PF00096	Zinc finger, C2H2 type	overlaps 136-492
362-384	PF00096	Zinc finger, C2H2 type	overlaps 136-492
390-412	PF00096	Zinc finger, C2H2 type	overlaps 136-492
418-440	PF00096	Zinc finger, C2H2 type	overlaps 136-492
446-468	PF00096	Zinc finger, C2H2 type	overlaps 136-492
474-496	PF00096	Zinc finger, C2H2 type	overlaps 136-492