ModCRE DB

Transcription factor

Q9Y2T7 - YBX2

Y-box-binding protein 2 (Contrin) (DNA-binding protein C) (Dbpc) (Germ cell-specific Y-box-binding protein) (MSY2 homolog)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 364 aa

7 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M01208_2.00 NN 70-40% CisBP TAGATAGA 62.9% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
q9y2t7.af3.0 ModCRE AlphaFold3 model GGGGGTGACC AlphaFold3 model · ModCRE PWM Open · Scan
q9y2t7.af3.1 ModCRE AlphaFold3 model CGGGCATGC AlphaFold3 model · ModCRE PWM Open · Scan
q9y2t7.af3.2 ModCRE AlphaFold3 model GGGGGTGACC AlphaFold3 model · ModCRE PWM Open · Scan
q9y2t7.af3.3 ModCRE AlphaFold3 model GGGGGGTTAGC AlphaFold3 model · ModCRE PWM Open · Scan
q9y2t7.af3.4 ModCRE AlphaFold3 model ATGCCTCACG AlphaFold3 model · ModCRE PWM Open · Scan
q9y2t7.af3.5 ModCRE AlphaFold3 model AGTTTTCCCT AlphaFold3 model · ModCRE PWM Open · Scan
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
SourceModelTemplateResidues modeledActions
Predicted = Lowq9y2t7.af3.0-Full sequenceView model · PDB
Predicted = Lowq9y2t7.af3.1-Full sequenceView model · PDB
Predicted = Lowq9y2t7.af3.2-Full sequenceView model · PDB
Predicted = Lowq9y2t7.af3.3-Full sequenceView model · PDB
Predicted = Lowq9y2t7.af3.4-Full sequenceView model · PDB
Predicted = Lowq9y2t7.af3.5-Full sequenceView model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomain
96-162PF00313'Cold-shock' DNA-binding domain