ModCRE DB

Transcription factor

Q9Y2Y9 - KLF13

Krueppel-like factor 13 (Basic transcription element-binding protein 3) (BTE-binding protein 3) (Novel Sp1-like zinc finger transcription factor 1) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor BTEB3) (Transcription factor NSLP1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 288 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0657.1 Known JASPAR ATGCCACGCCCCTTTTTG Direct PWM Open · Scan
MA0657.2 Known JASPAR TGCCACGCCCCTTTTTG Direct PWM Open · Scan
M02903_2.00 Known CisBP ATGCCACGCCCCTTTTTG Direct PWM Open · Scan
M04537_2.00 Known CisBP CGCCACGCCCCCC Direct PWM Open · Scan
M04538_2.00 Known CisBP CGCCACGCCCCCC Direct PWM Open · Scan
M04539_2.00 Known CisBP CGCCACGCCCCCC Direct PWM Open · Scan
M04540_2.00 Known CisBP CGCCACGCCCCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 288 aa
165-249

Region 165-249 0 PWM

Residues
85 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1A1F
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 165-2491 model
Actions
Predicted = Low TFS_Q9Y2Y9:165:249_1a1f_A_1 1a1f 165-249 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
167-191PF00096Zinc finger, C2H2 typeoverlaps 165-249
197-221PF00096Zinc finger, C2H2 typeoverlaps 165-249
227-249PF00096Zinc finger, C2H2 typeoverlaps 165-249