ModCRE DB

Transcription factor

Q9Y4S0 - DKFZp570I0164

Uncharacterized protein DKFZp570I0164

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 232 aa

31 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)25
MotifPredictionSourceDNA bindingSupportLogoActions
MA0155.1 NN 70-40% JASPAR TGTCAGGGGGCG 56.5% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 55.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 53.4% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 53.4% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 53.4% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 52.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 52.3% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 52.3% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 51.9% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 51.7% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 51.6% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 51.6% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 51.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 51.1% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 51.1% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 51.1% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 51.0% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 50.8% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 50.8% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_Q9Y4S0_Q9Y4S0_HUMAN:103:158_1llm_D_1 ModCRE Homology model GCCCCGCGGGGG Region 103-158 · 1 3D model Open · Scan
TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3j_E_1 ModCRE Homology model GGGAAACCCCCCCGGGGCCCCCC Region 18-232 · 1 3D model Open · Scan
TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3m_C_1 ModCRE Homology model GGAAAAATTCGGGCCGGTCCCGC Region 18-232 · 1 3D model Open · Scan
TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5wjq_D_1 ModCRE Homology model GGAAAAAACACGCCCGGTGCCCCC Region 18-232 · 1 3D model Open · Scan
TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:67:212_2i13_A_1 ModCRE Homology model TTTTACAAACTTCTTTGGAGA Region 67-212 · 1 3D model Open · Scan
TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:94:227_7w1m_H_1 ModCRE Homology model CGGGAATTCGCCACACAGCCCTT Region 94-227 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 232 aa
18-232

Region 18-232 6 PWM

Residues
215 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 18-2326 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_Q9Y4S0_Q9Y4S0_HUMAN:103:158_1llm_D_1 1llm 103-158 View model · PDB
Predicted = Low TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3j_E_1 5v3j 18-232 View model · PDB
Predicted = Low TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3m_C_1 5v3m 18-232 View model · PDB
Predicted = Low TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5wjq_D_1 5wjq 18-232 View model · PDB
Predicted = Low TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:67:212_2i13_A_1 2i13 67-212 View model · PDB
Predicted = Low TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:94:227_7w1m_H_1 7w1m 94-227 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 18:232 67 212 P:A · DNA:C,D 45.2% / 61.0% 94 View · PDB TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:67:212_2i13_A_1
1 5v3m 18:232 18 232 P:C · DNA:A,B 42.3% / 60.0% 77 View · PDB TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3m_C_1
2 5v3j 18:232 18 232 P:E · DNA:A,B 42.3% / 60.0% 77 View · PDB TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5v3j_E_1
3 5wjq 18:232 18 232 P:D · DNA:A,B 42.3% / 60.0% 76 View · PDB TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:18:232_5wjq_D_1
5 7w1m 18:232 94 227 P:H · DNA:F,G 37.3% / 54.5% 41 View · PDB TFS_tr_Q9Y4S0_Q9Y4S0_HUMAN:94:227_7w1m_H_1
1 1llm 18:232 103,103 158,158 P:C,D · DNA:A,B 33.9% / 50.0% 64,65 View · PDB DIMER_tr_Q9Y4S0_Q9Y4S0_HUMAN:103:158_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
49-71PF00096Zinc finger, C2H2 typeoverlaps 18-232
105-127PF00096Zinc finger, C2H2 typeoverlaps 18-232
133-156PF00096Zinc finger, C2H2 typeoverlaps 18-232