ModCRE DB

Transcription factor

Q9Y4Z2 - NEUROG3

Neurogenin-3 (NGN-3) (Class A basic helix-loop-helix protein 7) (bHLHa7) (Protein atonal homolog 5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 214 aa

32 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA0669.1 NN 70+% JASPAR AACATATGTC 88.5% identity Open · Scan
MA0623.1 NN 70+% JASPAR ACCATATGGT 75.2% identity Open · Scan
M05967_2.00 NN 70+% CisBP TGACATATGG 73.2% identity Open · Scan
Nearest Neighbor (70% - 40%)29
MotifPredictionSourceDNA bindingSupportLogoActions
MA0668.1 NN 70-40% JASPAR GCCATATGGT 66.6% identity Open · Scan
MA1109.1 NN 70-40% JASPAR GGACAGATGGCAG 66.6% identity Open · Scan
MA0623.2 NN 70-40% JASPAR GACATATGTC 64.3% identity Open · Scan
M05986_2.00 NN 70-40% CisBP ACCGCACCATCTGTC 58.6% identity Open · Scan
MA1468.1 NN 70-40% JASPAR AACATATGTC 55.7% identity Open · Scan
M01729_2.00 NN 70-40% CisBP AACATATGGT 54.7% identity Open · Scan
M02784_2.00 NN 70-40% CisBP ACCATATGTT 54.7% identity Open · Scan
MA0817.1 NN 70-40% JASPAR AAACATATGTTT 54.7% identity Open · Scan
MA0818.1 NN 70-40% JASPAR ACCATATGTT 54.7% identity Open · Scan
MA0678.1 NN 70-40% JASPAR ACCATATGGT 54.5% identity Open · Scan
M05962_2.00 NN 70-40% CisBP CCACCTGCC 54.2% identity Open · Scan
M01718_2.00 NN 70-40% CisBP AACATATGGT 52.8% identity Open · Scan
MA0633.1 NN 70-40% JASPAR ACCATATGTT 52.8% identity Open · Scan
MA1123.1 NN 70-40% JASPAR ATTCCAGATGTTT 52.8% identity Open · Scan
M06000_2.00 NN 70-40% CisBP CCAGATGGCACGGACACAACA 52.7% identity Open · Scan
MA0607.1 NN 70-40% JASPAR CCATATGT 52.7% identity Open · Scan
MA1472.1 NN 70-40% JASPAR AACAGCTGTT 52.7% identity Open · Scan
MA1485.1 NN 70-40% JASPAR GCAACAGCTGTTAC 52.7% identity Open · Scan
M00756_2.00 NN 70-40% CisBP CGCAGCTGTG 51.0% identity Open · Scan
M00930_2.00 NN 70-40% CisBP CATATATG 51.0% identity Open · Scan
MA1529.1 NN 70-40% JASPAR GGGCCGCAGCTGCGTCCC 51.0% identity Open · Scan
MA1638.1 NN 70-40% JASPAR ACCAGATGGC 51.0% identity Open · Scan
M03621_2.00 NN 70-40% CisBP AAAACAGCTGTTTT 50.8% identity Open · Scan
M05976_2.00 NN 70-40% CisBP ACCATATGGCG 50.8% identity Open · Scan
M05952_2.00 NN 70-40% CisBP ACCATCTGCCG 50.0% identity Open · Scan
M05980_2.00 NN 70-40% CisBP CACAGCTGAC 50.0% identity Open · Scan
MA0832.1 NN 70-40% JASPAR GCAACAGCTGTTGT 50.0% identity Open · Scan
MA1467.1 NN 70-40% JASPAR AACAGCTGTC 50.0% identity Open · Scan
MA1568.1 NN 70-40% JASPAR CACCATATGGCG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 214 aa
63-108

Region 63-108 0 PWM

Residues
46 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1NWQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 63-1081 model
Actions
Predicted = Low DIMER_Q9Y4Z2:63:108_1nwq_C_1 1nwq 63-108 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
84-135PF00010Helix-loop-helix DNA-binding domainoverlaps 63-108