Transcription factor

Q9Y5X4 - NR2E3

Photoreceptor-specific nuclear receptor (Nuclear receptor subfamily 2 group E member 3) (Retina-specific nuclear receptor)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 410 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7

Motif	Prediction	Source	DNA binding	Support	Actions
M00371_2.00	Known	CisBP	ACTTAATATATAC	Direct PWM	Open · Scan
M00369_2.00	Known	CisBP	AGGGATCAAG	Direct PWM	Open · Scan
M00370_2.00	Known	CisBP	GTCAGATATCAAG	Direct PWM	Open · Scan
M00372_2.00	Known	CisBP	AAAGATCA	Direct PWM	Open · Scan
M00373_2.00	Known	CisBP	AAAGATCAAT	Direct PWM	Open · Scan
M09298_2.00	Known	CisBP	AAAGTCAAAAGTCA	Direct PWM	Open · Scan
NR2E3_HUMAN.H11MO.0.C	Known	HOCOMOCO	AAAGTCAAAAGTCA	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 410 aa

47-122

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 47-1221 model

				Actions
Predicted = Low	DIMER_Q9Y5X4:47:122_1by4_B_1	1by4	47-122	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
46-114	PF00105	Double treble clef zinc finger, C4 type	overlaps 47-122
209-394	PF00104	Ligand-binding domain of nuclear hormone receptor	No overlap with loaded model regions