ModCRE DB

Transcription factor

Q9Y6R6 - ZNF780B

Zinc finger protein 780B (Zinc finger protein 779)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 833 aa

52 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M07729_2.00 NN 70+% CisBP CCAGACTGCCTGCCAAAACCCCCT 83.3% identity Open · Scan
Nearest Neighbor (70% - 40%)51
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 60.7% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 58.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 58.3% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 58.3% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 58.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 57.6% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 57.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 56.4% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.8% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 55.8% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 55.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 54.7% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.3% identity Open · Scan
M07693_2.00 NN 70-40% CisBP CTCCTGTGTGTGCCTTGGCTG 54.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 53.9% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 53.8% identity Open · Scan
M04524_2.00 NN 70-40% CisBP TAAATCACTGCATTTCACTCA 53.5% identity Open · Scan
MA0483.1 NN 70-40% JASPAR AAATCACAGCA 53.5% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 53.1% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 53.1% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 53.1% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 52.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 52.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 52.1% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 52.1% identity Open · Scan
M07634_2.00 NN 70-40% CisBP AAACGTCCACG 52.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 52.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.8% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 51.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 51.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.0% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 50.7% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 50.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.3% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 50.1% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 833 aa
277-440

Region 277-440 0 PWM

Residues
164 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 277-4401 model
Actions
Predicted = Low TFS_Q9Y6R6:277:440_5t0u_A_1 5t0u 277-440 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
193-215PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
221-243PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
249-271PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
277-299PF00096Zinc finger, C2H2 typeoverlaps 277-440
333-355PF00096Zinc finger, C2H2 typeoverlaps 277-440
361-383PF00096Zinc finger, C2H2 typeoverlaps 277-440
389-411PF00096Zinc finger, C2H2 typeoverlaps 277-440
417-439PF00096Zinc finger, C2H2 typeoverlaps 277-440
473-495PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
501-523PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
529-551PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
557-579PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
585-607PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
613-635PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
641-663PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
669-691PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
697-719PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
725-747PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
753-768PF13912C2H2-type zinc fingerNo overlap with loaded model regions