ModCRE DB

Transcription factor

R4GMT1 - MYNN

Myoneurin

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 238 aa

1 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08283_2.00 Known CisBP GACTTTTATTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 238 aa
42-232

Region 42-232 0 PWM

Residues
191 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 8SST
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models
Region 42-2326 models
Actions
Predicted = Low DIMER_R4GMT1:65:119_1llm_C_1 1llm 65-119 View model · PDB
Predicted = Low TFS_R4GMT1:42:229_8sst_A_1 8sst 42-229 View model · PDB
Predicted = Low TFS_R4GMT1:42:232_5v3j_E_1 5v3j 42-232 View model · PDB
Predicted = Low TFS_R4GMT1:42:232_5v3m_C_1 5v3m 42-232 View model · PDB
Predicted = Low TFS_R4GMT1:42:232_5wjq_D_1 5wjq 42-232 View model · PDB
Predicted = Low TFS_R4GMT1:77:231_2i13_A_1 2i13 77-231 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
42-62PF00096Zinc finger, C2H2 typeoverlaps 42-232
83-107PF13465Zinc-finger double domainoverlaps 42-232
125-147PF00096Zinc finger, C2H2 typeoverlaps 42-232
153-175PF00096Zinc finger, C2H2 typeoverlaps 42-232
181-203PF00096Zinc finger, C2H2 typeoverlaps 42-232
209-231PF00096Zinc finger, C2H2 typeoverlaps 42-232