ModCRE DB

Transcription factor

R4GMY9 - MYT1L

Myelin transcription factor 1 like

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 521 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_R4GMY9_R4GMY9_HUMAN:337:363_2jx1_A_1 ModCRE Homology model CTTTTTCA Region 337-363 · 1 3D model Open · Scan
TFS_tr_R4GMY9_R4GMY9_HUMAN:338:409_2mf8_A_1 ModCRE Homology model TAAAACTTTTGGA Region 338-409 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 521 aa
337-409

Region 337-409 2 PWM

Residues
73 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs · 2 summary rows
Templates
2JX1, 2MF8
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
2 active PDB models 2 summary rows
Region 337-4092 models · 2 summary rows
Actions
Predicted = Low TFS_tr_R4GMY9_R4GMY9_HUMAN:337:363_2jx1_A_1 2jx1 337-363 View model · PDB
Predicted = Low TFS_tr_R4GMY9_R4GMY9_HUMAN:338:409_2mf8_A_1 2mf8 338-409 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2jx1 337:409 337 363 P:A · DNA:B,C 81.5% / 88.9% 87 View · PDB TFS_tr_R4GMY9_R4GMY9_HUMAN:337:363_2jx1_A_1
1 2mf8 337:409 338 409 P:A · DNA:B,C 63.9% / 73.6% 96 View · PDB TFS_tr_R4GMY9_R4GMY9_HUMAN:338:409_2mf8_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
337-363PF01530Zinc finger, C2HC typeoverlaps 337-409
381-409PF01530Zinc finger, C2HC typeoverlaps 337-409
453-504PF08474Myelin transcription factor 1No overlap with loaded model regions