ModCRE DB

Transcription factor

S4R3C8 - TSHZ2

Teashirt zinc finger homeobox 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 194 aa

8 Generated PWM 8 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE8
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_1du0_A_1 ModCRE Homology model GTGTTTAATTCAGTCA Region 37-70 · 1 3D model Open · Scan
DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hos_B_1 ModCRE Homology model ATTCTAACTGATGTAG Region 37-70 · 1 3D model Open · Scan
DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hot_B_1 ModCRE Homology model GTTCAAAACTCTGCAG Region 37-70 · 1 3D model Open · Scan
TFS_tr_S4R3C8_S4R3C8_HUMAN:82:110_5ei9_E_1 ModCRE Homology model GGGGCACTTGTG Region 82-110 · 1 3D model Open · Scan
TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e93_A_1 ModCRE Homology model TACCACGTGG Region 86-110 · 1 3D model Open · Scan
TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e94_A_1 ModCRE Homology model AACACCGAGG Region 86-110 · 1 3D model Open · Scan
TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4gzn_C_1 ModCRE Homology model TTACAAAGA Region 86-112 · 1 3D model Open · Scan
TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4m9v_C_1 ModCRE Homology model TTACAAGTA Region 86-112 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 194 aa
37-70
82-112

Region 37-70 3 PWM

Residues
34 aa
Domains
PF26094 · Teashirt homolog 3-like, homeodomain
3D models
3 active PDBs · 3 summary rows
Templates
1DU0, 2HOS, 2HOT
Sources
Predicted = Low
Scan this region Show models

Region 82-112 5 PWM

Residues
31 aa
Domains
PF12874 · Zinc-finger of C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
4GZN, 4M9V, 5EI9, 6E93, 6E94
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
8 active PDB models 8 summary rows
Region 37-703 models · 3 summary rows
Actions
Predicted = Low DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_1du0_A_1 1du0 37-70 View model · PDB
Predicted = Low DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hos_B_1 2hos 37-70 View model · PDB
Predicted = Low DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hot_B_1 2hot 37-70 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1du0 37:71 37,37 70,69 P:A,B · DNA:C,D 32.4% / 55.9% 64,58 View · PDB DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_1du0_A_1
2 2hot 37:71 37,37 70,70 P:A,B · DNA:C,D 26.5% / 55.9% 60,58 View · PDB DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hot_B_1
3 2hos 37:71 37,37 70,70 P:A,B · DNA:C,D 26.5% / 55.9% 60,58 View · PDB DIMER_tr_S4R3C8_S4R3C8_HUMAN:37:70_2hos_B_1
Region 82-1125 models · 5 summary rows
Actions
Predicted = Low TFS_tr_S4R3C8_S4R3C8_HUMAN:82:110_5ei9_E_1 5ei9 82-110 View model · PDB
Predicted = Low TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e93_A_1 6e93 86-110 View model · PDB
Predicted = Low TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e94_A_1 6e94 86-110 View model · PDB
Predicted = Low TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4gzn_C_1 4gzn 86-112 View model · PDB
Predicted = Low TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4m9v_C_1 4m9v 86-112 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 6e94 82:112 86 110 P:A · DNA:C,D 44.0% / 60.0% 22 View · PDB TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e94_A_1
2 6e93 82:112 86 110 P:A · DNA:C,D 44.0% / 60.0% 22 View · PDB TFS_tr_S4R3C8_S4R3C8_HUMAN:86:110_6e93_A_1
5 5ei9 82:112 82 110 P:E · DNA:A,B 34.5% / 48.3% 26 View · PDB TFS_tr_S4R3C8_S4R3C8_HUMAN:82:110_5ei9_E_1
3 4m9v 82:112 86 112 P:C · DNA:A,B 33.3% / 55.6% 45 View · PDB TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4m9v_C_1
4 4gzn 82:112 86 112 P:C · DNA:A,B 33.3% / 55.6% 46 View · PDB TFS_tr_S4R3C8_S4R3C8_HUMAN:86:112_4gzn_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
9-73PF26094Teashirt homolog 3-like, homeodomainoverlaps 37-70
86-108PF12874Zinc-finger of C2H2 typeoverlaps 82-112