Region 30-58 0 PWM
- Residues
- 29 aa
- Domains
- PF10524 · Nuclear factor I protein pre-N-terminus
- 3D models
- 1 active PDB
- Templates
- 2LKX
- Sources
- Structure model
Transcription factor
S4R3W2 - NFIA
Nuclear factor 1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 511 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M03481_2.00 | Known | CisBP | GGTGCCAAGT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
511 aa
30-58
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 30-581 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_S4R3W2:30:58_2lkx_A_1 | 2lkx | 30-58 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 8-46 | PF10524 | Nuclear factor I protein pre-N-terminus | overlaps 30-58 |
| 69-170 | PF03165 | MH1 domain | No overlap with loaded model regions |
| 214-488 | PF00859 | CTF/NF-I family transcription modulation region | No overlap with loaded model regions |