ModCRE DB

Transcription factor

S4TMV6

UBR5/ZNF423 fusion protein

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 94 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M02669_2.00 NN 70+% CisBP GCACCCCTGGGTGCC 98.9% identity Open · Scan
M10151_2.00 NN 70+% CisBP GCACCCTTGGGTGC 98.9% identity Open · Scan
MA0116.1 NN 70+% JASPAR GGCACCCAGGGGTGC 98.9% identity Open · Scan
Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 94 aa
5-93

Region 5-93 0 PWM

Residues
89 aa
Domains
PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5K5J
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 5-931 model
Actions
Predicted = Low TFS_S4TMV6:5:93_5k5j_A_1 5k5j 5-93 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
39-62PF13894C2H2-type zinc fingeroverlaps 5-93
69-92PF00096Zinc finger, C2H2 typeoverlaps 5-93