ModCRE DB

Transcription factor

U3KPW8 - HOMEZ

Homeobox and leucine zipper encoding

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 324 aa

12 Generated PWM 10 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00518_2.00 NN 70-40% CisBP AAATCGATTT 63.1% identity Open · Scan
M02093_2.00 NN 70-40% CisBP TTACGTAA 55.1% identity Open · Scan
ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1 ModCRE Homology model AAAAAAAATGGGGCAC Region 194-242 · 1 3D model Open · Scan
DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1 ModCRE Homology model AAAACCACTAGGAGTA Region 194-242 · 1 3D model Open · Scan
DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1 ModCRE Homology model AAAACCACCGTGGGCA Region 194-242 · 1 3D model Open · Scan
DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1 ModCRE Homology model AGTACCACTTGGGGGA Region 194-242 · 1 3D model Open · Scan
DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1 ModCRE Homology model AAAACAGTGGGGCAC Region 194-242 · 1 3D model Open · Scan
TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1 ModCRE Homology model GTGCCCCGTTGGTTTT Region 194-242 · 1 3D model Open · Scan
TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1 ModCRE Homology model TAGCCCTAGTGTTTTT Region 194-242 · 1 3D model Open · Scan
TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1 ModCRE Homology model TGCCCCCGGTGGTTTT Region 194-242 · 1 3D model Open · Scan
TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1 ModCRE Homology model TCCCCCAAGTGGTTTT Region 194-242 · 1 3D model Open · Scan
TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1 ModCRE Homology model GTGCCCCACTGTTTT Region 194-242 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 324 aa
194-242

Region 194-242 10 PWM

Residues
49 aa
Domains
No overlapping PFAM annotation recorded
3D models
10 active PDBs · 10 summary rows
Templates
1DU0, 2HDD, 2HOS, 2HOT, 3HDD
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
10 active PDB models 10 summary rows
Region 194-24210 models · 10 summary rows
Actions
Predicted = Low DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1 1du0 194-242 View model · PDB
Predicted = Low DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1 2hdd 194-242 View model · PDB
Predicted = Low DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1 2hos 194-242 View model · PDB
Predicted = Low DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1 2hot 194-242 View model · PDB
Predicted = Low DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1 3hdd 194-242 View model · PDB
Predicted = Low TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1 1du0 194-242 View model · PDB
Predicted = Low TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1 2hdd 194-242 View model · PDB
Predicted = Low TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1 2hos 194-242 View model · PDB
Predicted = Low TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1 2hot 194-242 View model · PDB
Predicted = Low TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1 3hdd 194-242 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1du0 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 92,87 View · PDB TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1
1 1du0 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 92,87 View · PDB DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_1du0_A_1
2 2hdd 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 89,87 View · PDB TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1
2 2hdd 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 89,87 View · PDB DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hdd_A_1
5 3hdd 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 89,87 View · PDB TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1
5 3hdd 194:242 194,194 242,242 P:A,B · DNA:C,D 32.7% / 49.0% 89,87 View · PDB DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_3hdd_A_1
3 2hot 194:242 194,194 242,242 P:A,B · DNA:C,D 30.6% / 49.0% 87,84 View · PDB TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1
3 2hot 194:242 194,194 242,242 P:A,B · DNA:C,D 30.6% / 49.0% 87,84 View · PDB DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hot_A_1
4 2hos 194:242 194,194 242,242 P:A,B · DNA:C,D 30.6% / 49.0% 87,84 View · PDB TFS_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1
4 2hos 194:242 194,194 242,242 P:A,B · DNA:C,D 30.6% / 49.0% 87,84 View · PDB DIMER_tr_U3KPW8_U3KPW8_HUMAN:194:242_2hos_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
283-324PF11569Homeodomain leucine-zipper encoding, HomezNo overlap with loaded model regions