ModCRE DB

Transcription factor

U3KQJ9 - MEIS3

Meis homeobox 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 126 aa

57 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0782.1 NN 70+% JASPAR TGACAGGTGTCA 76.3% identity Open · Scan
MA0783.1 NN 70+% JASPAR TGACAGGTGTCA 72.5% identity Open · Scan
Nearest Neighbor (70% - 40%)55
MotifPredictionSourceDNA bindingSupportLogoActions
M02161_2.00 NN 70-40% CisBP TGACATGT 65.7% identity Open · Scan
M02168_2.00 NN 70-40% CisBP TTGACATGT 65.7% identity Open · Scan
M03859_2.00 NN 70-40% CisBP TGACAG 62.1% identity Open · Scan
M06346_2.00 NN 70-40% CisBP TTGACA 62.1% identity Open · Scan
MA0796.1 NN 70-40% JASPAR TGACAGCTGTCA 61.1% identity Open · Scan
MA1571.1 NN 70-40% JASPAR TGACAGCTGTCA 61.1% identity Open · Scan
M06342_2.00 NN 70-40% CisBP TTTTAACA 60.0% identity Open · Scan
M00483_2.00 NN 70-40% CisBP GTGATAC 59.4% identity Open · Scan
M05159_2.00 NN 70-40% CisBP GATGATACGG 59.4% identity Open · Scan
M05357_2.00 NN 70-40% CisBP AATGATACGC 59.4% identity Open · Scan
MA0631.1 NN 70-40% JASPAR GATAGGGTATCACTAAT 59.4% identity Open · Scan
MA1572.1 NN 70-40% JASPAR TGACAGCTGTCA 58.3% identity Open · Scan
M02136_2.00 NN 70-40% CisBP ATTGACATGT 57.8% identity Open · Scan
M00276_2.00 NN 70-40% CisBP ACTAATTAATT 57.5% identity Open · Scan
M01238_2.00 NN 70-40% CisBP TTGACAGGT 57.5% identity Open · Scan
M02032_2.00 NN 70-40% CisBP TGACATGTCA 57.5% identity Open · Scan
M02051_2.00 NN 70-40% CisBP TGTGACAGGT 57.5% identity Open · Scan
M02064_2.00 NN 70-40% CisBP ATTACAAG 57.5% identity Open · Scan
M02135_2.00 NN 70-40% CisBP CATGTCAT 57.5% identity Open · Scan
M05364_2.00 NN 70-40% CisBP TTGATTGATG 57.1% identity Open · Scan
M06246_2.00 NN 70-40% CisBP TTTTGACA 57.1% identity Open · Scan
M08574_2.00 NN 70-40% CisBP TTTGACAG 57.1% identity Open · Scan
MA0070.1 NN 70-40% JASPAR CCATCAATCAAA 57.1% identity Open · Scan
MA1113.1 NN 70-40% JASPAR GTGATTGACAGG 57.1% identity Open · Scan
M02102_2.00 NN 70-40% CisBP ATGATACCCC 56.7% identity Open · Scan
M02134_2.00 NN 70-40% CisBP TTTGACATGT 55.8% identity Open · Scan
MA0797.1 NN 70-40% JASPAR TGACAGCTGTCA 55.5% identity Open · Scan
M02057_2.00 NN 70-40% CisBP ATTGACACGT 55.0% identity Open · Scan
M02156_2.00 NN 70-40% CisBP CTTGACAT 55.0% identity Open · Scan
M02138_2.00 NN 70-40% CisBP AGTGACGGCA 54.5% identity Open · Scan
MA1114.1 NN 70-40% JASPAR GGGTGAGTGACAGGCGG 54.2% identity Open · Scan
M00425_2.00 NN 70-40% CisBP TGATACCC 54.0% identity Open · Scan
M06268_2.00 NN 70-40% CisBP AATGATA 54.0% identity Open · Scan
M06526_2.00 NN 70-40% CisBP TGATA 54.0% identity Open · Scan
MA1118.1 NN 70-40% JASPAR GTAACCTGATA 54.0% identity Open · Scan
MA1119.1 NN 70-40% JASPAR AACTGAAACCTGATAC 54.0% identity Open · Scan
M02096_2.00 NN 70-40% CisBP TTGACAAG 53.3% identity Open · Scan
M02054_2.00 NN 70-40% CisBP CATCTCAATCA 51.6% identity Open · Scan
M08208_2.00 NN 70-40% CisBP GAGTTGTAGT 51.6% identity Open · Scan
M00453_2.00 NN 70-40% CisBP ATTACATGAT 51.5% identity Open · Scan
M00456_2.00 NN 70-40% CisBP ATTACAA 51.5% identity Open · Scan
M05316_2.00 NN 70-40% CisBP ACGCGTACAACGCGT 51.5% identity Open · Scan
M06519_2.00 NN 70-40% CisBP TAACA 51.5% identity Open · Scan
M02133_2.00 NN 70-40% CisBP ATGACATG 51.4% identity Open · Scan
M02060_2.00 NN 70-40% CisBP TTTGACAGCA 51.3% identity Open · Scan
M00461_2.00 NN 70-40% CisBP ATGATACCC 50.0% identity Open · Scan
M01243_2.00 NN 70-40% CisBP TTTGATGTG 50.0% identity Open · Scan
M01250_2.00 NN 70-40% CisBP TCAATAATTG 50.0% identity Open · Scan
M02050_2.00 NN 70-40% CisBP TAATAATT 50.0% identity Open · Scan
M02220_2.00 NN 70-40% CisBP CAATCATTGG 50.0% identity Open · Scan
M04940_2.00 NN 70-40% CisBP CCGTATCATT 50.0% identity Open · Scan
M06335_2.00 NN 70-40% CisBP ATGATACC 50.0% identity Open · Scan
M06910_2.00 NN 70-40% CisBP TCAATAATTGA 50.0% identity Open · Scan
M06914_2.00 NN 70-40% CisBP ACAATAATTGA 50.0% identity Open · Scan
M08422_2.00 NN 70-40% CisBP ACACAAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 126 aa
86-120

Region 86-120 0 PWM

Residues
35 aa
Domains
PF05920 · Homeobox KN domain
3D models
1 active PDB
Templates
1MNM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 86-1201 model
Actions
Predicted = Low DIMER_U3KQJ9:86:120_1mnm_D_1 1mnm 86-120 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
86-120PF05920Homeobox KN domainoverlaps 86-120