ModCRE DB

Transcription factor

U3KQN1 - POU2F2

POU class 2 homeobox 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 320 aa

34 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)16
MotifPredictionSourceDNA bindingSupportLogoActions
M06556_2.00 NN 70+% CisBP TATGCAAATTAG 95.5% identity Open · Scan
M02245_2.00 NN 70+% CisBP ATGCTAATTA 95.4% identity Open · Scan
M02243_2.00 NN 70+% CisBP ATAATGCATA 91.8% identity Open · Scan
M02242_2.00 NN 70+% CisBP GTATAATTAG 89.8% identity Open · Scan
M02240_2.00 NN 70+% CisBP ATAATGAA 86.6% identity Open · Scan
M00553_2.00 NN 70+% CisBP ATGCATAA 86.4% identity Open · Scan
M02236_2.00 NN 70+% CisBP CTAATTAAC 86.4% identity Open · Scan
M09227_2.00 NN 70+% CisBP CTCATGAATATTCAAG 86.4% identity Open · Scan
MA0786.1 NN 70+% JASPAR TTATGCAAATTA 86.4% identity Open · Scan
MA0788.1 NN 70+% JASPAR ATTATGCTAATTT 86.4% identity Open · Scan
M07542_2.00 NN 70+% CisBP TGCATA 84.7% identity Open · Scan
M02235_2.00 NN 70+% CisBP CTAATTAA 83.6% identity Open · Scan
M05500_2.00 NN 70+% CisBP TTATGCAAATGAG 80.5% identity Open · Scan
MA0789.1 NN 70+% JASPAR TATGCAAAT 79.1% identity Open · Scan
M08032_2.00 NN 70+% CisBP CCATTGTTATGCAAA 71.6% identity Open · Scan
MA0792.1 NN 70+% JASPAR TATGCAAAT 71.6% identity Open · Scan
Nearest Neighbor (70% - 40%)18
MotifPredictionSourceDNA bindingSupportLogoActions
M00549_2.00 NN 70-40% CisBP GATAATGAG 67.0% identity Open · Scan
MA0627.1 NN 70-40% JASPAR TTGTATGCAAATTAGA 67.0% identity Open · Scan
MA0627.2 NN 70-40% JASPAR AATATGCAAATAA 66.6% identity Open · Scan
MA1115.1 NN 70-40% JASPAR ATATGCAAATT 66.6% identity Open · Scan
MA0507.1 NN 70-40% JASPAR TTCATTTGCATAT 66.5% identity Open · Scan
MA0142.1 NN 70-40% JASPAR CTTTGTTATGCAAAT 65.2% identity Open · Scan
MA0787.1 NN 70-40% JASPAR TTATGCAAATTA 64.8% identity Open · Scan
M02239_2.00 NN 70-40% CisBP TATGCAAATT 62.5% identity Open · Scan
M05454_2.00 NN 70-40% CisBP ATGCATAAATTAA 61.3% identity Open · Scan
M00802_2.00 NN 70-40% CisBP ATTATTAATA 61.1% identity Open · Scan
MA0784.1 NN 70-40% JASPAR AATATGCAAATTAG 59.7% identity Open · Scan
MA0791.1 NN 70-40% JASPAR ATGCATAATTAATGAG 58.2% identity Open · Scan
M10829_2.00 NN 70-40% CisBP ATATAATTATGCAAATTAAAAGA 57.1% identity Open · Scan
MA0790.1 NN 70-40% JASPAR ATGAATAATTAATG 56.7% identity Open · Scan
M00548_2.00 NN 70-40% CisBP GATAATTAA 55.7% identity Open · Scan
MA0785.1 NN 70-40% JASPAR AATATGCAAATT 55.3% identity Open · Scan
M02244_2.00 NN 70-40% CisBP ATGCATAT 55.2% identity Open · Scan
MA0683.1 NN 70-40% JASPAR ATGCATAATTAATGAG 55.2% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 320 aa
258-320

Region 258-320 0 PWM

Residues
63 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain
3D models
1 active PDB
Templates
5WC9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 258-3201 model
Actions
Predicted = Low DIMER_U3KQN1:258:320_5wc9_B_1 5wc9 258-320 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
258-320PF00157Pou domain - N-terminal to homeobox domainoverlaps 258-320